RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 TMEM53Q6P2H8 277 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 C10orf99Q6UWK7 81 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 ZNF562Q6V9R5 426 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 CCDC121Q6ZUS5 278 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 SLC16A14Q7RTX9 510 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 VMO1Q7Z5L0 202 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 CLDN22Q8N7P3 220 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 BHLHE23Q8NDY6 225 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 TMEM185AQ8NFB2 350 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 OR8B3Q8NGG8 313 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 MFSD8Q8NHS3 518 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 SFXN5Q8TD22 340 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 SLC7A6Q92536 515 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 L3HYPDHQ96EM0 354 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 OR8B2Q96RD0 313 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 WFDC6Q9BQY6 131 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 CHID1Q9BWS9 393 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 BCL2L14Q9BZR8 327 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 DPY30Q9C005 99 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 IQCGQ9H095 443 aaKnown RBP2.86□□□□□ -1.95
ATXN3-217ENST00000553287 SIRPDQ9H106 197 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 WDR76Q9H967 626 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 PALMDQ9NP74 551 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 INPP5EQ9NRR6 644 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 UFSP2Q9NUQ7 469 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 TMEM38BQ9NVV0 291 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 ZNRD1Q9P1U0 126 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 IL20RAQ9UHF4 553 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 STARD10Q9Y365 291 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 DNAJC15Q9Y5T4 150 aa2.86□□□□□ -1.95
ATXN3-217ENST00000553287 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 A0A087WUJ7 227 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 FBLL1A6NHQ2 334 aaKnown RBP2.85□□□□□ -1.95
ATXN3-217ENST00000553287 RNASEK-C17orf49H0YIS7 233 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 AIM2O14862 343 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 AZIN1O14977 448 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 ENSAO43768 121 aaKnown RBP2.85□□□□□ -1.95
ATXN3-217ENST00000553287 SNAP29O95721 258 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 GYPAP02724 150 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 BGLAPP02818 100 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 BCHEP06276 602 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 CD55P08174 381 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 OR8U8P0C7N1 319 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 MYL2P10916 166 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 RPS4Y1P22090 263 aaKnown RBP2.85□□□□□ -1.95
ATXN3-217ENST00000553287 PAX7P23759 505 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 FKBP2P26885 142 aaKnown RBP2.85□□□□□ -1.95
ATXN3-217ENST00000553287 HTR2AP28223 471 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 CHI3L1P36222 383 aaPredicted RBP2.85□□□□□ -1.95
ATXN3-217ENST00000553287 TGFBR2P37173 567 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 CRATP43155 626 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 RPL29P47914 159 aaKnown RBP2.85□□□□□ -1.95
ATXN3-217ENST00000553287 PSG4Q00888 419 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 FMODQ06828 376 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 SGCAQ16586 387 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 ZNF404Q494X3 552 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 CFAP157Q5JU67 520 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 AP1ARQ63HQ0 302 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 OR2T2Q6IF00 324 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 ARL9Q6T311 187 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 CALHM3Q86XJ0 350 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 RIMKLAQ8IXN7 391 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 FNDC5Q8NAU1 212 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 OR52P1PQ8NH57 321 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 AENQ8WTP8 325 aaKnown RBP2.85□□□□□ -1.95
ATXN3-217ENST00000553287 TWIST2Q8WVJ9 160 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 C10orf82Q8WW14 230 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 TMEM54Q969K7 222 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 CMBLQ96DG6 245 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 SEH1LQ96EE3 360 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 PLEKHA8Q96JA3 519 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 SLC35E1Q96K37 410 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 SAMD8Q96LT4 415 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 SLC35A5Q9BS91 424 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 GLTPQ9NZD2 209 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 PTTG3PQ9NZH4 202 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 OR1A1Q9P1Q5 309 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 MARCOQ9UEW3 520 aaPredicted RBP2.85□□□□□ -1.95
ATXN3-217ENST00000553287 TBK1Q9UHD2 729 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 ANGPT4Q9Y264 503 aa2.85□□□□□ -1.95
ATXN3-217ENST00000553287 ZNF443Q9Y2A4 671 aaPredicted RBP2.85□□□□□ -1.95
ATXN3-217ENST00000553287 EXOC1LA0A1B0GW35 172 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 A0A1B0GWA3 101 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 BTBD17A6NE02 478 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 FAAHO00519 579 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 KPNA4O00629 521 aaPredicted RBP2.84□□□□□ -1.95
ATXN3-217ENST00000553287 PLPP3O14495 311 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 NPFFO15130 113 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 TPST1O60507 370 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 AK1P00568 194 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 SNRPAP09012 282 aaKnown RBP2.84□□□□□ -1.95
ATXN3-217ENST00000553287 PGA4P0DJD7 388 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 PGA3P0DJD8 388 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 FUT1P19526 365 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 LAP3P28838 519 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 CD1BP29016 333 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 KIR2DS4P43632 304 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 GDI2P50395 445 aaKnown RBP2.84□□□□□ -1.95
ATXN3-217ENST00000553287 LINC00315P59091 139 aa2.84□□□□□ -1.95
ATXN3-217ENST00000553287 COPZ1P61923 177 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms