RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 OR6C3Q9NZP0 311 aa15.54■□□□□ 0.08
PTCH1-227ENST00000553256 MRPS28Q9Y2Q9 187 aaKnown RBP15.54■□□□□ 0.08
PTCH1-227ENST00000553256 A6NDX4 124 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 CRYBA1P05813 215 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 GTF2F2P13984 249 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 MAP2K4P45985 399 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 RAB13P51153 203 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 LGALS4P56470 323 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 MLLT11Q13015 90 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-227ENST00000553256 RBM48Q5RL73 367 aaKnown RBP15.53■□□□□ 0.08
PTCH1-227ENST00000553256 PRR31Q5SQ13 230 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 LIPKQ5VXJ0 399 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 SLC35E4Q6ICL7 350 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 TRAPPC6BQ86SZ2 158 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 RTN4RL2Q86UN3 420 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 ABHD12Q8N2K0 398 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 JAGN1Q8N5M9 183 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 FOXRED1Q96CU9 486 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-227ENST00000553256 Q96M66 194 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 TMED9Q9BVK6 235 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 TCF19Q9Y242 345 aa15.53■□□□□ 0.08
PTCH1-227ENST00000553256 C15orf65H3BRN8 121 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 OR7C1O76099 320 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-227ENST00000553256 IL1AP01583 271 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 CPEP16870 476 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 VHLP40337 213 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 QRFPP83859 136 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 GPR176Q14439 515 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 TBCEQ15813 527 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-227ENST00000553256 SSX2Q16385 188 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 LY6EQ16553 131 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 FBLN7Q53RD9 439 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 DHRS7BQ6IAN0 325 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-227ENST00000553256 OR52W1Q6IF63 320 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 SGMS2Q8NHU3 365 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 CNBD2Q96M20 576 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 BARHL1Q9BZE3 327 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 ZNF696Q9H7X3 374 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 ING3Q9NXR8 418 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 CALYQ9NYX4 217 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 FBLN5Q9UBX5 448 aa15.52■□□□□ 0.08
PTCH1-227ENST00000553256 MEIKINA0A087WXM9 373 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A10PA6NDY2 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 BTBD17A6NE02 478 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A18PA6NE21 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A16PA6NEW6 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A20PA6NIJ5 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A7PA6NKC0 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A12PA8MX19 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A5PA8MXJ8 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A23PA8MXZ1 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 DENRO43583 198 aaKnown RBP15.51■□□□□ 0.07
PTCH1-227ENST00000553256 CSTBP04080 98 aaKnown RBP15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A15PP0C7V4 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A13PP0C7W8 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A14PP0C7W9 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 FAM90A24PP0C7X0 464 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 RPS25P62851 125 aaKnown RBP15.51■□□□□ 0.07
PTCH1-227ENST00000553256 BRICD5Q6PL45 260 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 ZNF497Q6ZNH5 498 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 LIAT1Q6ZQX7 453 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 UFD1Q92890 307 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 RNF114Q9Y508 228 aa15.51■□□□□ 0.07
PTCH1-227ENST00000553256 TRAV39A0A0B4J263 110 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 MT-ND4P03905 459 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 SRMP19623 302 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 HTR1DP28221 377 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 SSTR5P35346 364 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 KIR2DS4P43632 304 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 DYNC1I2Q13409 638 aaKnown RBP15.5■□□□□ 0.07
PTCH1-227ENST00000553256 SSX1Q16384 188 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 HLA-DRB5Q30154 266 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 AWAT2Q6E213 333 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 CEACAM19Q7Z692 300 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 Q8N2B8 174 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 ZNF565Q8N9K5 539 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 MGLLQ99685 303 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 BANF2Q9H503 90 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 PCDHB16Q9NRJ7 776 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 DPM3Q9P2X0 92 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 GHRLQ9UBU3 117 aa15.5■□□□□ 0.07
PTCH1-227ENST00000553256 FAM172BPA6NC97 362 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 SLC22A1O15245 554 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 VSIG8P0DPA2 414 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 MGMTP16455 207 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 GLP1RP43220 463 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 EFNB2P52799 333 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 FAM189A2Q15884 450 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 OR10A7Q8NGE5 316 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 ZNF596Q8TC21 504 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 MRGPRDQ8TDS7 321 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 TMEM203Q969S6 136 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 S100A13Q99584 98 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 RANBP3Q9H6Z4 567 aaPredicted RBP15.49■□□□□ 0.07
PTCH1-227ENST00000553256 ACOT13Q9NPJ3 140 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 IDI2-AS1Q9NZ38 188 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 HILPDAQ9Y5L2 63 aa15.49■□□□□ 0.07
PTCH1-227ENST00000553256 WNK1Q9H4A3 2382 aa15.48■□□□□ 0.07
PTCH1-227ENST00000553256 BUB1B-PAK6H3BSN5 160 aa15.48■□□□□ 0.07
PTCH1-227ENST00000553256 LOXL3P58215 753 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms