RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 PIPOXQ9P0Z9 390 aa7.01□□□□□ -1.29
RAB5B-210ENST00000553116 DNAJB11Q9UBS4 358 aa7.01□□□□□ -1.29
RAB5B-210ENST00000553116 TRAPPC2LQ9UL33 140 aa7.01□□□□□ -1.29
RAB5B-210ENST00000553116 CCL21O00585 134 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 ARPC5O15511 151 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 PIGPP57054 158 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 HOXA4Q00056 320 aaPredicted RBP7□□□□□ -1.29
RAB5B-210ENST00000553116 SORDQ00796 357 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 LY6DQ14210 128 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 MSMPQ1L6U9 139 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 C3orf36Q3SXR2 165 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 SPIN3Q5JUX0 258 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 ZNF565Q8N9K5 539 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 POC1AQ8NBT0 407 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 TMEM185AQ8NFB2 350 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 TMEM230Q96A57 120 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 RTBDNQ9BSG5 229 aaPredicted RBP7□□□□□ -1.29
RAB5B-210ENST00000553116 Q9N2K0 584 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 MEMO1Q9Y316 297 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 ATP23Q9Y6H3 246 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 ADGRG4Q8IZF6 3080 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 TOR1AO14656 332 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 HSPA12AO43301 675 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 OR2A4O95047 310 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 SFT2D2O95562 160 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 NAPSAO96009 420 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 SCTP09683 121 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 PTAFRP25105 342 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 SEZ6L2Q6UXD5 910 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 WDR82Q6UXN9 313 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 GSG1LQ6UXU4 331 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 C5orf24Q7Z6I8 188 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 MRPL30Q8TCC3 161 aaKnown RBP7□□□□□ -1.29
RAB5B-210ENST00000553116 TMEM171Q8WVE6 324 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 SECTM1Q8WVN6 248 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 OR2V2Q96R30 315 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 OR2A7Q96R45 310 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 C12orf57Q99622 126 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 RDH8Q9NYR8 311 aa7□□□□□ -1.29
RAB5B-210ENST00000553116 TRAV39A0A0B4J263 110 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 TRDCB7Z8K6 153 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 L7N2F9 121 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 SLC33A1O00400 549 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 ATXN7O15265 892 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 IGHV3-13P01766 116 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 CTSDP07339 412 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 RCC1P18754 421 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 AADACP22760 399 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 MDH2P40926 338 aaKnown RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 BSPH1Q075Z2 132 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 SNTB1Q13884 538 aaKnown RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 LAMTOR1Q6IAA8 161 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 ADAM5Q6NVV9 412 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 Q6ZPA2 131 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 MRPL37Q9BZE1 423 aaKnown RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 NGBQ9NPG2 151 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 KCNIP3Q9Y2W7 256 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 CEACAM18A8MTB9 384 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 VSTM5A8MXK1 200 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 H7C1Q1 480 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 PPYP01298 95 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 IFNA2P01563 188 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 HOXB5P09067 269 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 PPP3CBP16298 524 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 AP2S1P53680 142 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 ERVK11-1P61568 191 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 NKX6-1P78426 367 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 Q6P435 159 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 MOGAT3Q86VF5 341 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 UBALD1Q8TB05 177 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 LINC00052Q96N35 136 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 GON7Q9BXV9 100 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 LIME1Q9H400 295 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 RBM7Q9Y580 266 aaKnown RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 RFPL4AA6NLU0 287 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 LINC00587B1AMM8 73 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 RFPL4AL1F8VTS6 287 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 C4BPBP20851 252 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 TNFSF4P23510 183 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 SERPINF1P36955 418 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 CA7P43166 264 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 GABRA2P47869 451 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 HLA-DRB3P79483 266 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 FGL1Q08830 312 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 ZNF146Q15072 292 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 LY6G6FQ5SQ64 297 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 ZNF660Q6AZW8 331 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 DHRS11Q6UWP2 260 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 ACP7Q6ZNF0 438 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 LINC00518Q8N0U6 118 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 ST6GALNAC3Q8NDV1 305 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 OR10J5Q8NHC4 309 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 ITLN1Q8WWA0 313 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 RTN4IP1Q8WWV3 396 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-210ENST00000553116 ASB13Q8WXK3 278 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 KIRREL1Q96J84 757 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 CACNA1AO00555 2505 aa6.99□□□□□ -1.29
RAB5B-210ENST00000553116 M0R233 179 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 ADAP1O75689 374 aa6.98□□□□□ -1.29
RAB5B-210ENST00000553116 RGS11O94810 467 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms