RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 PMVKQ15126 192 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 IGFL2Q6UWQ7 119 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 DNM1P46Q6ZS02 220 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 NOTCH2NLQ7Z3S9 236 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 C6orf120Q7Z4R8 191 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 NFE4Q86UQ8 179 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 ZBTB8OSQ8IWT0 167 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 SLC35G3Q8N808 338 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 ZNF614Q8N883 585 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 OR9I1Q8NGQ6 314 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 OR9G1Q8NH87 305 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 IL22RA2Q969J5 263 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 FAM3DQ96BQ1 224 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 DCPSQ96C86 337 aaKnown RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 SEH1LQ96EE3 360 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 PYURFQ96I23 114 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 LINC00477Q96M19 166 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 OR52E6Q96RD3 313 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 ZSCAN16Q9H4T2 348 aaPredicted RBP3.26□□□□□ -1.89
USP44-208ENST00000552440 PYCARDQ9ULZ3 195 aa3.26□□□□□ -1.89
USP44-208ENST00000552440 A0A087WWV3 80 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 MAP1LC3B2A6NCE7 125 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 EEF1E1-BLOC1S5C9J1V9 151 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 C16orf97H3BN30 126 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 K7EQS6 105 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 K7N7A8 449 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 SLC17A3O00476 420 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 FAAHO00519 579 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 EEF1E1O43324 174 aaKnown RBP3.25□□□□□ -1.89
USP44-208ENST00000552440 MFSD11O43934 449 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 SPAG7O75391 227 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 ARL6IP5O75915 188 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 EPPINO95925 133 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 S100PP25815 95 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 AQP1P29972 269 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 S100A7P31151 101 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 PRSS3P35030 304 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 CDKN2AP42771 156 aaKnown RBP3.25□□□□□ -1.89
USP44-208ENST00000552440 MEOX2P50222 304 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 RPS21P63220 83 aaKnown RBP3.25□□□□□ -1.89
USP44-208ENST00000552440 INCA1Q0VD86 236 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 LAMTOR4Q0VGL1 99 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 GSG1Q2KHT4 349 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 C1orf100Q5SVJ3 147 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 SAMD13Q5VXD3 122 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 SPATA31B1PQ5VZV4 182 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 TBPL2Q6SJ96 375 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 TOMM20LQ6UXN7 152 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 OR51S1Q8NGJ8 323 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 OR1N2Q8NGR9 330 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 TAF15Q92804 592 aaKnown RBP eCLIP3.25□□□□□ -1.89
USP44-208ENST00000552440 OR52B2Q96RD2 323 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 CDX2Q99626 313 aaPredicted RBP3.25□□□□□ -1.89
USP44-208ENST00000552440 TMEM204Q9BSN7 226 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 SLC17A9Q9BYT1 436 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 MAP1LC3BQ9GZQ8 125 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 SRMSQ9H3Y6 488 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 TPT1P8Q9HAU6 139 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 ZNF226Q9NYT6 803 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 ZNF629Q9UEG4 869 aaPredicted RBP3.25□□□□□ -1.89
USP44-208ENST00000552440 JPT1Q9UK76 154 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 PKIGQ9Y2B9 76 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 CLUHO75153 1309 aa3.25□□□□□ -1.89
USP44-208ENST00000552440 DCCP43146 1447 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 PLEKHH2Q8IVE3 1493 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 CDC42BPBQ9Y5S2 1711 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 IGHV1OR15-1A0A075B7D0 117 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 D6RAR5 112 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 C8orf87E5RJ46 101 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 NDUFS5O43920 106 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 PDCD6O75340 191 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 PPP1R3DO95685 299 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 PDYNP01213 254 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 PFN1P07737 140 aaKnown RBP3.24□□□□□ -1.89
USP44-208ENST00000552440 BPGMP07738 259 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 CA5AP35218 305 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 H2BFSP57053 126 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 NANOS2P60321 138 aaKnown RBP3.24□□□□□ -1.89
USP44-208ENST00000552440 FKBP3Q00688 224 aaKnown RBP3.24□□□□□ -1.89
USP44-208ENST00000552440 C1DQ13901 141 aaKnown RBP3.24□□□□□ -1.89
USP44-208ENST00000552440 N4BP2L1Q5TBK1 243 aaPredicted RBP3.24□□□□□ -1.89
USP44-208ENST00000552440 TSPO2Q5TGU0 170 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 UNQ9370/PRO34162Q6UXP9 181 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 ALKAL1Q6UXT8 129 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 C4orf22Q6V702 233 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 Q6ZRP5 223 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 C18orf65Q6ZTR6 163 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 STPG4Q8N801 248 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 UBAC2Q8NBM4 344 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 GPR26Q8NDV2 337 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 OR52L1Q8NGH7 329 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 OR51A2Q8NGJ7 313 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 OR5J2Q8NH18 312 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 OR1S1Q8NH92 325 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 GALNT14Q96FL9 552 aa3.24□□□□□ -1.89
USP44-208ENST00000552440 MRPL48Q96GC5 212 aaKnown RBP3.24□□□□□ -1.89
USP44-208ENST00000552440 ACY3Q96HD9 319 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms