RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 TAS2R8Q9NYW2 309 aa7.93□□□□□ -1.14
LIMA1-211ENST00000552338 TAS2R3Q9NYW6 316 aa7.93□□□□□ -1.14
LIMA1-211ENST00000552338 OR6C3Q9NZP0 311 aa7.93□□□□□ -1.14
LIMA1-211ENST00000552338 DUX4Q9UBX2 424 aa7.93□□□□□ -1.14
LIMA1-211ENST00000552338 ELF5Q9UKW6 265 aaPredicted RBP7.93□□□□□ -1.14
LIMA1-211ENST00000552338 UBE2J1Q9Y385 318 aaPredicted RBP7.93□□□□□ -1.14
LIMA1-211ENST00000552338 LINC00312Q9Y6C7 94 aa7.93□□□□□ -1.14
LIMA1-211ENST00000552338 ARHGAP32A7KAX9 2087 aa7.93□□□□□ -1.14
LIMA1-211ENST00000552338 UNC79Q9P2D8 2635 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 PDZD2O15018 2839 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 IGHV4-61A0A0C4DH41 118 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 ANKRD20A5PA0PJZ0 165 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 TMEM30CPA0ZSE6 113 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 ODAMA1E959 279 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 UBE2QL1A1L167 161 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 KIAA1324LA8MWY0 1029 aaPredicted RBP7.92□□□□□ -1.14
LIMA1-211ENST00000552338 RBBP9O75884 186 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 RBP4P02753 201 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 CD74P04233 296 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 LIPFP07098 398 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 SELLP14151 372 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 RPS2P15880 293 aaKnown RBP7.92□□□□□ -1.14
LIMA1-211ENST00000552338 TBPP20226 339 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 SNU13P55769 128 aaKnown RBP7.92□□□□□ -1.14
LIMA1-211ENST00000552338 GNG2P59768 71 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 ACTBP60709 375 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 ACTG1P63261 375 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 AESQ08117 197 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 DYRK1AQ13627 763 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 HMGN3Q15651 99 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 BAK1Q16611 211 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 TMEM30BQ3MIR4 351 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 KRBOX4Q5JUW0 171 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 NKAPLQ5M9Q1 402 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 LY6G6FQ5SQ64 297 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 AVPI1Q5T686 147 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 CD276Q5ZPR3 534 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 BRICD5Q6PL45 260 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 GDPD3Q7L5L3 318 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 IZUMO1Q8IYV9 350 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 Q8N402 240 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 ZNF565Q8N9K5 539 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 ASCC1Q8N9N2 400 aaKnown RBP7.92□□□□□ -1.14
LIMA1-211ENST00000552338 OR52I2Q8NH67 350 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 DYRK2Q92630 601 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 CYYR1Q96J86 154 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 THAP7Q9BT49 309 aaPredicted RBP7.92□□□□□ -1.14
LIMA1-211ENST00000552338 SSBP3Q9BWW4 388 aaPredicted RBP7.92□□□□□ -1.14
LIMA1-211ENST00000552338 KLK11Q9UBX7 282 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 MRPS7Q9Y2R9 242 aaKnown RBP7.92□□□□□ -1.14
LIMA1-211ENST00000552338 ABCA12Q86UK0 2595 aa7.92□□□□□ -1.14
LIMA1-211ENST00000552338 CSMD2Q7Z408 3487 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 MED13LQ71F56 2210 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.91□□□□□ -1.14
LIMA1-211ENST00000552338 NAV2Q8IVL1 2488 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 KIR2DS1A0A191URI9 304 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 hADV38S2A0JD32 116 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 ZNF729A6NN14 1252 aaPredicted RBP7.91□□□□□ -1.14
LIMA1-211ENST00000552338 C15orf65H3BRN8 121 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 F2RL2O00254 374 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 FOXH1O75593 365 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 TFF1P04155 84 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 HEXAP06865 529 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 PTHLHP12272 177 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 USF1P22415 310 aaPredicted RBP7.91□□□□□ -1.14
LIMA1-211ENST00000552338 RCVRNP35243 200 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 KIR2DS4P43632 304 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 GLIPR1P48060 266 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 DLX6P56179 175 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 HTD2P86397 168 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 DGCR2P98153 550 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 ARFRP1Q13795 201 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 KIR2DS1Q14954 304 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 Q3ZCU0 254 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 ESCO2Q56NI9 601 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 Q5PR19 223 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 C6orf183Q5T699 404 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 TCF23Q7RTU1 214 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 SNX29P2Q8IUI4 249 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 LYSMD2Q8IV50 215 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 C11orf42Q8N5U0 333 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 TMEM229BQ8NBD8 167 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 TMEM185AQ8NFB2 350 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 OR52M1Q8NGK5 317 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 FAM216AQ8WUB2 273 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 NUDCD2Q8WVJ2 157 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 CABLES2Q9BTV7 478 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 UNKLQ9H9P5 680 aaKnown RBP7.91□□□□□ -1.14
LIMA1-211ENST00000552338 RAB9BQ9NP90 201 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 CLN8Q9UBY8 286 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 KIF25Q9UIL4 384 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 RPUSD1Q9UJJ7 312 aaKnown RBP7.91□□□□□ -1.14
LIMA1-211ENST00000552338 PCDHB10Q9UN67 800 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 ABCA2Q9BZC7 2435 aa7.91□□□□□ -1.14
LIMA1-211ENST00000552338 A0A087X0M5 115 aa7.9□□□□□ -1.14
LIMA1-211ENST00000552338 A0A1B0GX30 115 aa7.9□□□□□ -1.14
LIMA1-211ENST00000552338 ISPDA4D126 451 aa7.9□□□□□ -1.14
LIMA1-211ENST00000552338 C17orf98A8MV24 154 aa7.9□□□□□ -1.14
LIMA1-211ENST00000552338 TRDCB7Z8K6 153 aa7.9□□□□□ -1.14
LIMA1-211ENST00000552338 UPK1BO75841 260 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms