RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 STMN2Q93045 179 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 MAL2Q969L2 176 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 SPTSSAQ969W0 71 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 OR52E6Q96RD3 313 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 MCHR1Q99705 422 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 LITAFQ99732 161 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 MICU1Q9BPX6 476 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 HSPB9Q9BQS6 159 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 WDR12Q9GZL7 423 aaKnown RBP1.64□□□□□ -2.15
PTCH1-223ENST00000551623 TSPYL1Q9H0U9 437 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 C1orf21Q9H246 121 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 SYT4Q9H2B2 425 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 FN3KQ9H479 309 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 RAD21L1Q9H4I0 556 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 SRD5A3Q9H8P0 318 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 SP140LQ9H930 580 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 PLEKHA3Q9HB20 300 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF286AQ9HBT8 521 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 AIG1Q9NVV5 245 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 TAS2R3Q9NYW6 316 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CD300AQ9UGN4 299 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ENPP5Q9UJA9 477 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 HAO1Q9UJM8 370 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 PYCARDQ9ULZ3 195 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 SLC7A7Q9UM01 511 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ANGPT4Q9Y264 503 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 RHBDD3Q9Y3P4 386 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 DNAH2Q9P225 4427 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 HMCN2Q8NDA2 5059 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 IGHV4-4A0A075B6R2 117 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 LOC102724200A0A096LPH7 203 aaPredicted RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 FAM172BPA6NC97 362 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 KRTAP16-1A8MUX0 517 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 F5H5K5 113 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 H7C1C5 153 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 J3QT63 122 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 KPNA4O00629 521 aaPredicted RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 ARPC3O15145 178 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 AIREO43918 545 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 SLC16A7O60669 478 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 SERPINB7O75635 380 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 SERPINA1P01009 418 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 IGKV1D-33P01593 117 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 IGKV1-33P01594 117 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 CSN2P05814 226 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 NCK1P16333 377 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 PPIBP23284 216 aaKnown RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 ACKR3P25106 362 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 CD1BP29016 333 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 GPR4P46093 362 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 GABRA2P47869 451 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 MRPL19P49406 292 aaKnown RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 CRYBA2P53672 197 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 PRRX1P54821 245 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 MFAP2P55001 183 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 APOC4P55056 127 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 LCN6P62502 163 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 GNG3P63215 75 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 CDK6Q00534 326 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 RELQ04864 619 aaPredicted RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 PRDX4Q13162 271 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 MADCAM1Q13477 382 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 MEP1BQ16820 701 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 CEACAM21Q3KPI0 293 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 RNF212Q495C1 297 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 SLC36A3Q495N2 470 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 TEX30Q5JUR7 227 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 C1orf134Q5TEV5 83 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF660Q6AZW8 331 aaPredicted RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 FAM53AQ6NSI3 398 aaPredicted RBP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 DNM1P34Q6PK57 102 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 CORO6Q6QEF8 472 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 GDPD3Q7L5L3 318 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 SHFQ7M4L6 423 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 NOXA1Q86UR1 476 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 HAPLN4Q86UW8 402 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF573Q86YE8 665 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 ZDHHC21Q8IVQ6 265 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 NKAIN4Q8IVV8 208 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 MSRB3Q8IXL7 192 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 KIRREL3Q8IZU9 778 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 RNF148Q8N7C7 305 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 C8orf31Q8N9H6 132 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 OR5A2Q8NGI9 324 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 OR4C15Q8NGM1 316 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 OR2T10Q8NGZ9 312 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 OR9G1Q8NH87 305 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 PFN4Q8NHR9 129 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 C11orf45Q8TAV5 145 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF671Q8TAW3 534 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 HAVCR2Q8TDQ0 301 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM239Q8WW34 195 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 RASSF5Q8WWW0 418 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.63□□□□□ -2.15
PTCH1-223ENST00000551623 GTF2H4Q92759 462 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 FRZBQ92765 325 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 TOMM40LQ969M1 308 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 SGK3Q96BR1 496 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 BPIFA2Q96DR5 249 aa1.63□□□□□ -2.15
PTCH1-223ENST00000551623 Q96M85 177 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms