RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 FAM185AQ8N0U4 392 aa9.72□□□□□ -0.85
RAB5C-208ENST00000551338 RELL2Q8NC24 303 aaPredicted RBP9.72□□□□□ -0.85
RAB5C-208ENST00000551338 LHFPL5Q8TAF8 219 aa9.72□□□□□ -0.85
RAB5C-208ENST00000551338 SECTM1Q8WVN6 248 aa9.72□□□□□ -0.85
RAB5C-208ENST00000551338 DCUN1D4Q92564 292 aa9.72□□□□□ -0.85
RAB5C-208ENST00000551338 RRNAD1Q96FB5 475 aaKnown RBP9.72□□□□□ -0.85
RAB5C-208ENST00000551338 C18orf12Q96KH6 178 aa9.72□□□□□ -0.85
RAB5C-208ENST00000551338 GSX2Q9BZM3 304 aa9.72□□□□□ -0.85
RAB5C-208ENST00000551338 PIGMQ9H3S5 423 aa9.72□□□□□ -0.85
RAB5C-208ENST00000551338 Q9UFV3 132 aa9.72□□□□□ -0.85
RAB5C-208ENST00000551338 KCNIP3Q9Y2W7 256 aa9.72□□□□□ -0.85
RAB5C-208ENST00000551338 TRAV39A0A0B4J263 110 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 KANTRA0A1W2PQU2 76 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 MSGN1A6NI15 193 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 ZSCAN5BA6NJL1 495 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 A6NLC8 198 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 POM121CA8CG34 1229 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 NPIPB11E5RHQ5 1161 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 H7C1Q1 480 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 GPR31O00270 319 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 SH2D1BO14796 132 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 SPDEFO95238 335 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 RLN2P04090 185 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 ZNF250P15622 560 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 LMO1P25800 156 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 GNRHRP30968 328 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 GLRXP35754 106 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 CD200P41217 278 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 FAM27E3Q08E93 113 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 HMGN3Q15651 99 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 IAH1Q2TAA2 248 aaPredicted RBP9.71□□□□□ -0.86
RAB5C-208ENST00000551338 FIP1L1Q6UN15 594 aaKnown RBP9.71□□□□□ -0.86
RAB5C-208ENST00000551338 GFRALQ6UXV0 394 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 MRGPRGQ86SM5 289 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 LGI3Q8N145 548 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 OR1S1Q8NH92 325 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 GLYATL2Q8WU03 294 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 CNTNAP3BQ96NU0 1288 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 TP53RKQ96S44 253 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 SYT3Q9BQG1 590 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 CNTNAP3Q9BZ76 1288 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 SLC5A7Q9GZV3 580 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 CCL28Q9NRJ3 127 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 MBNL3Q9NUK0 354 aaKnown RBP9.71□□□□□ -0.86
RAB5C-208ENST00000551338 UFSP2Q9NUQ7 469 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 OR14J1Q9UGF5 321 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 KIF25Q9UIL4 384 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 TUBD1Q9UJT1 453 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 PCDHB10Q9UN67 800 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 MEMO1Q9Y316 297 aa9.71□□□□□ -0.86
RAB5C-208ENST00000551338 ATP6V1G2-DDX39BF2Z307 99 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 MPPED1O15442 326 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 PHF1O43189 567 aaPredicted RBP9.7□□□□□ -0.86
RAB5C-208ENST00000551338 KCNAB3O43448 404 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 PSPNO60542 156 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 PTBP3O95758 552 aaKnown RBP9.7□□□□□ -0.86
RAB5C-208ENST00000551338 IFNA21P01568 189 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 IGHV3-13P01766 116 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 CRYAAP02489 173 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 NMBP08949 121 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 EGR1P18146 543 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 BMP5P22003 454 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 LUMP51884 338 aaPredicted RBP9.7□□□□□ -0.86
RAB5C-208ENST00000551338 TMPRSS3P57727 454 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 C1QTNF12Q5T7M4 302 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 ALKBH2Q6NS38 261 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 ZNF818PQ6ZRF7 136 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 C22orf34Q6ZV56 151 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 LYZL2Q7Z4W2 148 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 TBC1D26Q86UD7 250 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 ZNF565Q8N9K5 539 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 PRR7Q8TB68 274 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 SNRNP40Q96DI7 357 aaKnown RBP9.7□□□□□ -0.86
RAB5C-208ENST00000551338 MUCL1Q96DR8 90 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 KIRREL1Q96J84 757 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 CITED4Q96RK1 184 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 ARPC5LQ9BPX5 153 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 ASF1BQ9NVP2 202 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 GSKIPQ9P0R6 139 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 OR1A1Q9P1Q5 309 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 WIPI2Q9Y4P8 454 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 DSCAMO60469 2012 aa9.7□□□□□ -0.86
RAB5C-208ENST00000551338 IGLV3-9A0A075B6K5 115 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 C3orf85A0A1B0GTC6 90 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 HSD17B6O14756 317 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 DYSFO75923 2080 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 TFF1P04155 84 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 S100A10P60903 97 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 RAB14P61106 215 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 MZT1Q08AG7 82 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 SPRNQ5BIV9 151 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 COMMD7Q86VX2 200 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 INO80EQ8NBZ0 244 aaPredicted RBP9.69□□□□□ -0.86
RAB5C-208ENST00000551338 LRRC29Q8WV35 223 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 TMEM171Q8WVE6 324 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 CXorf58Q96LI9 332 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 AQP10Q96PS8 301 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 DMRTA2Q96SC8 542 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 USB1Q9BQ65 265 aaKnown RBP9.69□□□□□ -0.86
RAB5C-208ENST00000551338 ZNF471Q9BX82 626 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms