RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 TMEM165Q9HC07 324 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 Q9N2K0 584 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 C12orf4Q9NQ89 552 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 IFT46Q9NQC8 304 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF701Q9NV72 531 aaPredicted RBP6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 ETAA1Q9NY74 926 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 TAS2R8Q9NYW2 309 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF107Q9UII5 783 aaPredicted RBP6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 FBXO9Q9UK97 447 aaPredicted RBP6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 MAB21L2Q9Y586 359 aa6.75□□□□□ -1.33
DEPDC4-207ENST00000549249 PPIAL4EA0A075B759 164 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF736B4DX44 427 aaPredicted RBP6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 PPIAL4DF5H284 164 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 RAB3DO95716 219 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 IGHV2-70P01814 119 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 AKAIN1P0CW23 69 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 PPIAL4FP0DN26 164 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 MUC1P15941 1255 aaPredicted RBP6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 SLC6A1P30531 599 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 HRH1P35367 487 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 GABRA2P47869 451 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 ZMYND11Q15326 602 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 TRIM16LQ309B1 348 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 PLA1AQ53H76 456 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 LYPD2Q6UXB3 125 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF497Q6ZNH5 498 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 Q6ZNX1 250 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF788Q6ZQV5 615 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 C1orf87Q8N0U7 546 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 FGFRL1Q8N441 504 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 FAM216BQ8N7L0 139 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 ASCC1Q8N9N2 400 aaKnown RBP6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNRF1Q8ND25 227 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 BEST4Q8NFU0 473 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 OR4K15Q8NH41 348 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 OR56B4Q8NH76 319 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 NEK7Q8TDX7 302 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 NEU4Q8WWR8 484 aaPredicted RBP6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 SDSLQ96GA7 329 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 SNX22Q96L94 193 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 ST6GALNAC5Q9BVH7 336 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 TINAGL1Q9GZM7 467 aaPredicted RBP6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 ING3Q9NXR8 418 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 CTSZQ9UBR2 303 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 GLS2Q9UI32 602 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 PPIAL4AQ9Y536 164 aa6.74□□□□□ -1.33
DEPDC4-207ENST00000549249 YLPM1P49750 1951 aaKnown RBP6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 HRNRQ86YZ3 2850 aaPredicted RBP6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 TRAV39A0A0B4J263 110 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 TRAV38-1A0A0B4J264 116 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 LRRC30A6NM36 301 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 H3BUI4 141 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 K7N7A8 449 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 SIGLEC5O15389 551 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 PMP2P02689 132 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 CSN2P05814 226 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 GIFP27352 417 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 MDH2P40926 338 aaKnown RBP6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 CCR6P51684 374 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 PAX5Q02548 391 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 AESQ08117 197 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 RBM39Q14498 530 aaKnown RBP6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 HFEQ30201 348 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 ATPAF1Q5TC12 328 aaPredicted RBP6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 MZT2BQ6NZ67 158 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 CCBE1Q6UXH8 406 aaPredicted RBP6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 Q6ZS46 218 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 Q6ZS49 121 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 ZNF561Q8N587 486 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 TPRX1Q8N7U7 411 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 MINDY2Q8NBR6 621 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 DUSP18Q8NEJ0 188 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 DEDD2Q8WXF8 326 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 NRGNQ92686 78 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 MRGPRFQ96AM1 343 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 UPRTQ96BW1 309 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 CITED4Q96RK1 184 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 CCL13Q99616 98 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 SLC6A7Q99884 636 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 TMEM246Q9BRR3 403 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 MMP28Q9H239 520 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 LIME1Q9H400 295 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 CHMP1AQ9HD42 196 aaPredicted RBP6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 MBNL3Q9NUK0 354 aaKnown RBP6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 KIF25Q9UIL4 384 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 EDARQ9UNE0 448 aa6.73□□□□□ -1.33
DEPDC4-207ENST00000549249 POLQO75417 2590 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 ARHGAP32A7KAX9 2087 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 CELSR2Q9HCU4 2923 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 IGKV1-6A0A0C4DH72 117 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 FAM240BA0A1B0GVZ2 78 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 NAP1L6A6NFF2 107 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 MGST3O14880 152 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 TK1P04183 234 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 TCRBP04435 133 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 SCTP09683 121 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 GSTT2P0CG29 244 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 DAOP14920 347 aa6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 RCC1P18754 421 aaPredicted RBP6.72□□□□□ -1.33
DEPDC4-207ENST00000549249 TBPP20226 339 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms