RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 SPEM1Q8N4L4 309 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 OR56B2PQ8NGI1 322 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 SAP25Q8TEE9 199 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 DUSP23Q9BVJ7 150 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 A0A0G2JRQ6 117 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 GJE1A6NN92 205 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 RAB2AP61019 212 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 PDZD11Q5EBL8 140 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 PYY3Q5JQD4 70 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 SPNS3Q6ZMD2 512 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 CMTM1Q8IZ96 169 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 FAM185AQ8N0U4 392 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 LINC00469Q8N7U9 141 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 AGBL5Q8NDL9 886 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 SPIN2AQ99865 258 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 SPIN2BQ9BPZ2 258 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 CALHM2Q9HA72 323 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 TAAR3PQ9P1P4 343 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 A0A096LPE4 126 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 A0A1W2PPZ6 126 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 ZNF732B4DXR9 585 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 PAX9P55771 341 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 MLF1P58340 268 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 RPL23AP62750 156 aaKnown RBP12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 ID3Q02535 119 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 TMEM267Q0VDI3 215 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 TRIM61Q5EBN2 209 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 C9orf152Q5JTZ5 239 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 GFI1BQ5VTD9 330 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 WDR5BQ86VZ2 330 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 CLDND2Q8NHS1 167 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 SMDT1Q9H4I9 107 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 FAM86C1Q9NVL1 165 aa12.12□□□□□ -0.47
RAPGEF3-218ENST00000548919 K7ESF4 209 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 WRBO00258 174 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 CYB5BO43169 146 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 FGF5P12034 268 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 SP5Q6BEB4 398 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 NAPSAO96009 420 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 MMP7P09237 267 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 VDAC1P21796 283 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 PRDX4Q13162 271 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 HLA-BQ31612 363 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 C20orf204Q6ZNR8 217 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 THNSL2Q86YJ6 484 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 OR51H1Q8NH63 302 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 M1APQ8TC57 530 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 IFI44Q8TCB0 444 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 UNKLQ9H9P5 680 aaKnown RBP12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 MTCH1Q9NZJ7 389 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 GNG13Q9P2W3 67 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 ZNF391Q9UJN7 358 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 COL6A3P12111 3177 aa12.11□□□□□ -0.47
RAPGEF3-218ENST00000548919 DOCK7Q96N67 2140 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 SLC34A2O95436 690 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 HLA-HP01893 362 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 UCP1P25874 307 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 CDX1P47902 265 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 OR2B11Q5JQS5 317 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 ZNF506Q5JVG8 444 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 ZNF610Q8N9Z0 462 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 GNPNAT1Q96EK6 184 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 ZNF488Q96MN9 340 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 RNF115Q9Y4L5 304 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 PRRC2CQ9Y520 2896 aaKnown RBP12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 BTBD17A6NE02 478 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 TRGC2P03986 189 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 MPV17LQ2QL34 196 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 C17orf78Q8N4C9 275 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 TVP23CQ96ET8 276 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 ATP5SQ99766 215 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 C1QTNF5Q9BXJ0 243 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 FAM186AA6NE01 2351 aa12.1□□□□□ -0.47
RAPGEF3-218ENST00000548919 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 PGLYRP1O75594 196 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 P04436 131 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 HSPB1P04792 205 aaKnown RBP12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 SRD5A2P31213 254 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 CXCL12P48061 93 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 PCBD1P61457 104 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 ZNF295-AS1Q8N0V1 137 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 OR8G5Q8NG78 346 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 SPSB4Q96A44 273 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 RSG1Q9BU20 258 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 VSIRQ9H7M9 311 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 DIDO1Q9BTC0 2240 aaKnown RBP12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 CHD3Q12873 2000 aaKnown RBP12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 ZFP92A6NM28 416 aa12.09□□□□□ -0.47
RAPGEF3-218ENST00000548919 C9J4A7 227 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms