RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 RNPS1Q15287 305 aaKnown RBP8.49□□□□□ -1.05
SMARCD1-205ENST00000548573 PYY3Q5JQD4 70 aa8.49□□□□□ -1.05
SMARCD1-205ENST00000548573 OR2B11Q5JQS5 317 aa8.49□□□□□ -1.05
SMARCD1-205ENST00000548573 CMTM1Q8IZ96 169 aa8.49□□□□□ -1.05
SMARCD1-205ENST00000548573 RYDENQ9NUL5 291 aaKnown RBP8.49□□□□□ -1.05
SMARCD1-205ENST00000548573 TMEM242Q9NWH2 141 aa8.49□□□□□ -1.05
SMARCD1-205ENST00000548573 RNF115Q9Y4L5 304 aa8.49□□□□□ -1.05
SMARCD1-205ENST00000548573 LOC102723971A0A1B0GUV8 181 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 CHST1O43916 411 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 F10P00742 488 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 SCTP09683 121 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 CEBPGP53567 150 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 PAX9P55771 341 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 MLF1P58340 268 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 FGF12P61328 243 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 RPL23AP62750 156 aaKnown RBP8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 HLA-DRB3P79483 266 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 RUNX1Q01196 453 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 PNRC1Q12796 327 aaPredicted RBP8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 HERPUD1Q15011 391 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 MPV17LQ2QL34 196 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 CEACAM16Q2WEN9 425 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 NRN1LQ496H8 165 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 CDCP2Q5VXM1 449 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 ABLIM2Q6H8Q1 611 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 ZNF343Q6P1L6 599 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 COLCA1Q6ZS62 124 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 GGNQ86UU5 652 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 RPS19BP1Q86WX3 136 aaKnown RBP8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 TMEM217Q8N7C4 229 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 FGFBP3Q8TAT2 258 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 MED12Q93074 2177 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 LAMA1P25391 3075 aa8.48□□□□□ -1.05
SMARCD1-205ENST00000548573 ELOA3CA0A087WX78 387 aaPredicted RBP8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 IGKV1D-13A0A0B4J2D9 117 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 ZNF587BE7ETH6 402 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 TGOLN2O43493 480 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HIST1H2BKO60814 126 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HIST1H2BJP06899 126 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 MMP7P09237 267 aaPredicted RBP8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 IGKV1-13P0DP09 117 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 SLC25A6P12236 298 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 BCL3P20749 454 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HIST1H2BOP23527 126 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HIST1H2BBP33778 126 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HIST1H2BDP58876 126 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HIST1H2BCP62807 126 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 ZNF154Q13106 437 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HIST2H2BEQ16778 126 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 DNLZQ5SXM8 178 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 STX12Q86Y82 276 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 H1FOOQ8IZA3 346 aaPredicted RBP8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 SPEM1Q8N4L4 309 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 AGBL5Q8NDL9 886 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HIST1H2BHQ93079 126 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 SGCZQ96LD1 299 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HIST1H2BNQ99877 126 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HIST1H2BMQ99879 126 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 GPR35Q9HC97 309 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 TAAR3PQ9P1P4 343 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 HS3ST3B1Q9Y662 390 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 ATP23Q9Y6H3 246 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 TRBV23-1A0A0A0MS06 115 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 TGIF2-C20orf24A0A0A6YYL0 155 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 KLF7O75840 302 aaPredicted RBP8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 IFNA5P01569 189 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 KLK3P07288 261 aaPredicted RBP8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 GTF3AQ92664 365 aaKnown RBP8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 NAT6Q93015 286 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 ADGRG7Q96K78 797 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 RAB40CQ96S21 281 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 RIMS4Q9H426 269 aaPredicted RBP8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 ZNF576Q9H609 170 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 CALHM2Q9HA72 323 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 CCL28Q9NRJ3 127 aa8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 NOSIPQ9Y314 301 aaKnown RBP8.47□□□□□ -1.05
SMARCD1-205ENST00000548573 SHANK1Q9Y566 2161 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 BRWD1Q9NSI6 2320 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 A0A1B0GU03 582 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 PPP1R2P9O14990 202 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 CYB5BO43169 146 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 CXCL13O43927 109 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 PGLYRP1O75594 196 aaPredicted RBP8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 WNT2P09544 360 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 F2RP25116 425 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 S100GP29377 79 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 CD200P41217 278 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 RND2P52198 227 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 CD81P60033 236 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 SPEGQ15772 3267 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 ACSF3Q4G176 576 aaPredicted RBP8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 YRDCQ86U90 279 aaKnown RBP8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 OR2V1Q8NHB1 315 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 SAP25Q8TEE9 199 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 CISD1Q9NZ45 108 aaKnown RBP8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 RNF150Q9ULK6 438 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 URGCP-MRPS24S4R325 110 aa8.46□□□□□ -1.05
SMARCD1-205ENST00000548573 EYSQ5T1H1 3165 aa8.46□□□□□ -1.06
SMARCD1-205ENST00000548573 RTTNQ86VV8 2226 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms