RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 DEKP35659 375 aaKnown RBP2.53□□□□□ -2
PTCH1-216ENST00000548379 UGT2B10P36537 528 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 CD79BP40259 229 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 SSR2P43308 183 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 PGGHGQ32M88 737 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 SOHLH1Q5JUK2 328 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 MBOAT1Q6ZNC8 495 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 MRPL21Q7Z2W9 205 aaKnown RBP2.53□□□□□ -2
PTCH1-216ENST00000548379 ST13P4Q8IZP2 240 aaPredicted RBP2.53□□□□□ -2
PTCH1-216ENST00000548379 TCAIMQ8N3R3 496 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 JAGN1Q8N5M9 183 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 RNF10Q8N5U6 811 aaKnown RBP2.53□□□□□ -2
PTCH1-216ENST00000548379 ASCC1Q8N9N2 400 aaKnown RBP2.53□□□□□ -2
PTCH1-216ENST00000548379 SNX31Q8N9S9 440 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 NOXO1Q8NFA2 376 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 OR52E5Q8NH55 327 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 ZNF502Q8TBZ5 544 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 ZNF721Q8TF20 911 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 PPWD1Q96BP3 646 aaKnown RBP2.53□□□□□ -2
PTCH1-216ENST00000548379 FAM3DQ96BQ1 224 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 SEH1LQ96EE3 360 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 OR4K3Q96R72 315 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 EFCAB11Q9BUY7 163 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 UGT2B28Q9BY64 529 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 ANGPTL4Q9BY76 406 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 REG4Q9BYZ8 158 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 GAL3ST2Q9H3Q3 398 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 RPP21Q9H633 154 aaKnown RBP2.53□□□□□ -2
PTCH1-216ENST00000548379 LRTM1Q9HBL6 345 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 FAIMQ9NVQ4 179 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 MYEF2Q9P2K5 600 aaKnown RBP2.53□□□□□ -2
PTCH1-216ENST00000548379 LGALS13Q9UHV8 139 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 DKKL1Q9UK85 242 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 ST3GAL6Q9Y274 331 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 CFL2Q9Y281 166 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 C15orf41Q9Y2V0 281 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 GOLT1BQ9Y3E0 138 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 CHCHD2Q9Y6H1 151 aaPredicted RBP2.53□□□□□ -2
PTCH1-216ENST00000548379 ZNF106Q9H2Y7 1883 aaKnown RBP2.53□□□□□ -2
PTCH1-216ENST00000548379 RP1P56715 2156 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 IGLV4-69A0A075B6H9 119 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 A0A1W2PP18 115 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 GOLGA6L10A6NI86 522 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 DEFB108AA8MXU0 73 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 ZNF99A8MXY4 864 aaPredicted RBP2.52□□□□□ -2.01
PTCH1-216ENST00000548379 C11orf94C9JXX5 98 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 M0R3G1 203 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 ACOX3O15254 700 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 SIVA1O15304 175 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 SNAI2O43623 268 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 EIF4E2O60573 245 aaKnown RBP2.52□□□□□ -2.01
PTCH1-216ENST00000548379 FCN3O75636 299 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 STK16O75716 305 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 CCNB2O95067 398 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 SCELO95171 688 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 RAB3DO95716 219 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 GPR75O95800 540 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 APOA1P02647 267 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 IGKV3-11P04433 115 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 TLX1NBP0CAT3 122 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 SLC35E2BP0CK96 405 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 HIST1H1TP22492 207 aaPredicted RBP2.52□□□□□ -2.01
PTCH1-216ENST00000548379 IL12BP29460 328 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 PPOXP50336 477 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 ZNF138P52744 262 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 CDKN2DP55273 166 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 CTBP2P56545 445 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 HERVK_113P61574 105 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 PSPHP78330 225 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 PLCXD2Q0VAA5 305 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 SLAQ13239 276 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 SLAMF1Q13291 335 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 EBPQ15125 230 aaKnown RBP2.52□□□□□ -2.01
PTCH1-216ENST00000548379 TRIP13Q15645 432 aaPredicted RBP2.52□□□□□ -2.01
PTCH1-216ENST00000548379 ZNF726P1Q15940 193 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 BCL2A1Q16548 175 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 KCTD19Q17RG1 926 aaPredicted RBP2.52□□□□□ -2.01
PTCH1-216ENST00000548379 HSP90B2PQ58FF3 399 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 SPANXN3Q5MJ09 141 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 MED27Q6P2C8 311 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 DEGS2Q6QHC5 323 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 LINC01551Q86U37 167 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 APRG1Q8IVJ8 170 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 LRRC75AQ8NAA5 344 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 GATSQ8NAP1 163 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 TMEM104Q8NE00 496 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 OR7G1Q8NGA0 311 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 OR4K17Q8NGC6 315 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 OR51L1Q8NGJ5 315 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 OR4A15Q8NGL6 344 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 OR13C9Q8NGT0 318 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 CAPSLQ8WWF8 208 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 EXOSC8Q96B26 276 aaKnown RBP2.52□□□□□ -2.01
PTCH1-216ENST00000548379 CREB3L1Q96BA8 519 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 OSBPL11Q9BXB4 747 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 SPNS1Q9H2V7 528 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 IFI27L2Q9H2X8 130 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 NTN4Q9HB63 628 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 SDHAF3Q9NRP4 125 aa2.52□□□□□ -2.01
PTCH1-216ENST00000548379 GMEB1Q9Y692 573 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms