RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 PLA1AQ53H76 456 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 PRR31Q5SQ13 230 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 AWAT2Q6E213 333 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 SLC35E4Q6ICL7 350 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 BRICD5Q6PL45 260 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 BAIAP2L2Q6UXY1 529 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 OR13A1Q8NGR1 328 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 PLPPR1Q8TBJ4 325 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 UFD1Q92890 307 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 CREB3L1Q96BA8 519 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 CITED1Q99966 193 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 SPACA1Q9HBV2 294 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 CALYQ9NYX4 217 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 FBLN5Q9UBX5 448 aa11.93□□□□□ -0.5
CCDC38-205ENST00000546947 A0A1W2PP11 408 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 ATP6V1G2O95670 118 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 IL1AP01583 271 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 IGLV1-47P01700 117 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 KIR2DS4P43632 304 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 PRRX1P54821 245 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 RBM48Q5RL73 367 aaKnown RBP11.92□□□□□ -0.5
CCDC38-205ENST00000546947 ATAD3CQ5T2N8 411 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 PRSS48Q7RTY5 328 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 OR10A7Q8NGE5 316 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 OR4C13Q8NGP0 309 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 PHYHIPQ92561 330 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 KIRREL1Q96J84 757 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 TMED9Q9BVK6 235 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 LINC00574Q9H8X3 128 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 ZNF286AQ9HBT8 521 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 TCF7L1Q9HCS4 588 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 IDI2-AS1Q9NZ38 188 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 ZNF581Q9P0T4 197 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 DPM3Q9P2X0 92 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 GHRLQ9UBU3 117 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 RAB26Q9ULW5 256 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 HILPDAQ9Y5L2 63 aa11.92□□□□□ -0.5
CCDC38-205ENST00000546947 TMEM30CPA0ZSE6 113 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM172BPA6NC97 362 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 A6NDX4 124 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A10PA6NDY2 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A18PA6NE21 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A16PA6NEW6 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A20PA6NIJ5 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A7PA6NKC0 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A22PA8MWA6 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A12PA8MX19 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A5PA8MXJ8 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A23PA8MXZ1 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 LEUTXA8MZ59 168 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 NPIPB11E5RHQ5 1161 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 TOR1AO14656 332 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 SC5DO75845 299 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A15PP0C7V4 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A13PP0C7W8 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A14PP0C7W9 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 FAM90A24PP0C7X0 464 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 GZMHP20718 246 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 GABRA5P31644 462 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 CEACAM3P40198 252 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 RAB13P51153 203 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 ARHGDIBP52566 201 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 GP2P55259 537 aaKnown RBP11.91□□□□□ -0.5
CCDC38-205ENST00000546947 TPBGQ13641 420 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 INSL4Q14641 139 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 TRAM1Q15629 374 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 HLA-DRB5Q30154 266 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 LIPKQ5VXJ0 399 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 C11orf88Q6PI97 169 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 MRGPRDQ8TDS7 321 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 CNBD2Q96M20 576 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 NPFFR1Q9GZQ6 430 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 CCDC90BQ9GZT6 254 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 RCC2Q9P258 522 aaKnown RBP11.91□□□□□ -0.5
CCDC38-205ENST00000546947 BLOC1S6Q9UL45 172 aa11.91□□□□□ -0.5
CCDC38-205ENST00000546947 H3BUI4 141 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 F2RL2O00254 374 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 TIMM23O14925 209 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 CHST1O43916 411 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 UCHL1P09936 223 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 UBBP0CG47 229 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 MGMTP16455 207 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 NFYBP25208 207 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 VHLP40337 213 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 KRTAP10-3P60369 221 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 SRSF4Q08170 494 aaKnown RBP11.9□□□□□ -0.5
CCDC38-205ENST00000546947 MLLT11Q13015 90 aaPredicted RBP11.9□□□□□ -0.5
CCDC38-205ENST00000546947 RBM39Q14498 530 aaKnown RBP11.9□□□□□ -0.5
CCDC38-205ENST00000546947 HSD17B12Q53GQ0 312 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 FAM27D1Q5T7N8 215 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 GLT8D1Q68CQ7 371 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 CCBE1Q6UXH8 406 aaPredicted RBP11.9□□□□□ -0.5
CCDC38-205ENST00000546947 SLC16A12Q6ZSM3 486 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 CEACAM19Q7Z692 300 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 LRRTM1Q86UE6 522 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 OR9G1Q8NH87 305 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 NEK7Q8TDX7 302 aa11.9□□□□□ -0.5
CCDC38-205ENST00000546947 MCRIP1C9JLW8 97 aa11.89□□□□□ -0.51
CCDC38-205ENST00000546947 BUB1B-PAK6H3BSN5 160 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms