RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 LY6EQ16553 131 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 C17orf58Q2M2W7 97 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 LDLRAD2Q5SZI1 272 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 LIPKQ5VXJ0 399 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 SLC35E4Q6ICL7 350 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 DYNAPQ8N1N2 210 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 ABHD12Q8N2K0 398 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 OR4P4Q8NGL7 312 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 OR13A1Q8NGR1 328 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 NDNFQ8TB73 568 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 CCDC90BQ9GZT6 254 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 RANBP3Q9H6Z4 567 aaPredicted RBP12.85□□□□□ -0.35
DDX54-204ENST00000546898 LINC00574Q9H8X3 128 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 CALYQ9NYX4 217 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 RCC2Q9P258 522 aaKnown RBP12.85□□□□□ -0.35
DDX54-204ENST00000546898 GHRLQ9UBU3 117 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 PITPNC1Q9UKF7 332 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 TCF19Q9Y242 345 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A10PA6NDY2 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A18PA6NE21 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A16PA6NEW6 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A20PA6NIJ5 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A7PA6NKC0 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A22PA8MWA6 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A12PA8MX19 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A5PA8MXJ8 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A23PA8MXZ1 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 IL1AP01583 271 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 IGLV1-47P01700 117 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A15PP0C7V4 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A13PP0C7W8 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A14PP0C7W9 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 FAM90A24PP0C7X0 464 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 UBBP0CG47 229 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 PSMA1P25786 263 aaKnown RBP12.84□□□□□ -0.35
DDX54-204ENST00000546898 GDNFP39905 211 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 INSL4Q14641 139 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 TBCEQ15813 527 aaPredicted RBP12.84□□□□□ -0.35
DDX54-204ENST00000546898 HSD17B12Q53GQ0 312 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 ATAD3CQ5T2N8 411 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 DTX3Q8N9I9 347 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 OR10A7Q8NGE5 316 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 PIFOQ8TCI5 191 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 CREB3L1Q96BA8 519 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 KIRREL1Q96J84 757 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 ZNF286AQ9HBT8 521 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 MGAM2Q2M2H8 2515 aa12.84□□□□□ -0.35
DDX54-204ENST00000546898 TMEM30CPA0ZSE6 113 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 H3BUI4 141 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 UCHL1P09936 223 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 HSMCR30P0CW71 290 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 MGMTP16455 207 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 GP2P55259 537 aaKnown RBP12.83□□□□□ -0.36
DDX54-204ENST00000546898 PROK1P58294 105 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 RBM39Q14498 530 aaKnown RBP12.83□□□□□ -0.36
DDX54-204ENST00000546898 HLA-DRB5Q30154 266 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 PLA1AQ53H76 456 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 FAM27D1Q5T7N8 215 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 GLT8D1Q68CQ7 371 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 BAIAP2L2Q6UXY1 529 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 CEACAM19Q7Z692 300 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 LRRTM1Q86UE6 522 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 OR4C13Q8NGP0 309 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 NEK7Q8TDX7 302 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 CST11Q9H112 138 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 ZNF696Q9H7X3 374 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 IDI2-AS1Q9NZ38 188 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 ZNF581Q9P0T4 197 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 DPM3Q9P2X0 92 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 FBLN5Q9UBX5 448 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 HILPDAQ9Y5L2 63 aa12.83□□□□□ -0.36
DDX54-204ENST00000546898 LEUTXA8MZ59 168 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 NPIPB11E5RHQ5 1161 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 F2RL2O00254 374 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 TOR1AO14656 332 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 CRTAPO75718 401 aaPredicted RBP12.82□□□□□ -0.36
DDX54-204ENST00000546898 CPEP16870 476 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 SRMP19623 302 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 CEACAM3P40198 252 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 ARHGDIBP52566 201 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 PRRX1P54821 245 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 GABARAPL2P60520 117 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 PRR31Q5SQ13 230 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 C11orf88Q6PI97 169 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 BRICD5Q6PL45 260 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 OR9G1Q8NH87 305 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 MRGPRDQ8TDS7 321 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 Q96M66 194 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 MGLLQ99685 303 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 CITED1Q99966 193 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 NPFFR1Q9GZQ6 430 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 Q9H521 79 aa12.82□□□□□ -0.36
DDX54-204ENST00000546898 FAM172BPA6NC97 362 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 A6NDX4 124 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 MCRIP1C9JLW8 97 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 CHST1O43916 411 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 MRPS14O60783 128 aaKnown RBP12.81□□□□□ -0.36
DDX54-204ENST00000546898 CA11O75493 328 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 ARL6IP5O75915 188 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 GLAP06280 429 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms