RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 MTFP1Q9UDX5 166 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 ACACBO00763 2458 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 ATRXP46100 2492 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 PCNX1Q96RV3 2341 aa7.12□□□□□ -1.27
VPS29-203ENST00000546588 SMG1Q96Q15 3661 aaKnown RBP7.12□□□□□ -1.27
VPS29-203ENST00000546588 ANKRD20A5PA0PJZ0 165 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 SERPINE3A8MV23 424 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 ZNF732B4DXR9 585 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 CLDN14O95500 239 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 PGA5P0DJD9 388 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 GTF2F2P13984 249 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 HIST1H1DP16402 221 aaKnown RBP7.11□□□□□ -1.27
VPS29-203ENST00000546588 EGR1P18146 543 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 GCH1P30793 250 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 UQCRFS1P47985 274 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 TMEM50BP56557 158 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 RBM11P57052 281 aaKnown RBP7.11□□□□□ -1.27
VPS29-203ENST00000546588 KLF3P57682 345 aaPredicted RBP7.11□□□□□ -1.27
VPS29-203ENST00000546588 TAS2R60P59551 318 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 DEFA1P59665 94 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 DEFA3P59666 94 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 DGCR2P98153 550 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 BSPH1Q075Z2 132 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 MZT1Q08AG7 82 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 ZNF154Q13106 437 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 IL13RA2Q14627 380 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 MPV17LQ2QL34 196 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 TRIM16LQ309B1 348 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 ALKBH6Q3KRA9 238 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 MOGAT2Q3SYC2 334 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 LBHQ53QV2 105 aaPredicted RBP7.11□□□□□ -1.27
VPS29-203ENST00000546588 PYDC2Q56P42 97 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 BEX5Q5H9J7 111 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 OLFML2AQ68BL7 652 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 DCDC5Q6ZRR9 648 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 SMIM15Q7Z3B0 74 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 C11orf53Q8IXP5 236 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 DUSP18Q8NEJ0 188 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 OR13G1Q8NGZ3 307 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 CA5BP1Q8WTZ4 195 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 MBD6Q96DN6 1003 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 LURAP1Q96LR2 239 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 GPER1Q99527 375 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 C12orf57Q99622 126 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 MICU1Q9BPX6 476 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 NRIP2Q9BQI9 281 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 NICN1Q9BSH3 213 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 THAP7Q9BT49 309 aaPredicted RBP7.11□□□□□ -1.27
VPS29-203ENST00000546588 TPPP3Q9BW30 176 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 ESRP2Q9H6T0 727 aaKnown RBP7.11□□□□□ -1.27
VPS29-203ENST00000546588 AUNIPQ9H7T9 357 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 KCNJ16Q9NPI9 418 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 CA10Q9NS85 328 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 TMEM100Q9NV29 134 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 TAS2R8Q9NYW2 309 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 MTCH1Q9NZJ7 389 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 NDRG3Q9UGV2 375 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 POLDIP2Q9Y2S7 368 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 KCNK7Q9Y2U2 307 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 DYSFO75923 2080 aa7.11□□□□□ -1.27
VPS29-203ENST00000546588 A0A1W2PP11 408 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 FAM230AA0A1W2PPH8 454 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 DEFB108AA8MXU0 73 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 ABCD4O14678 606 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 ITGB1BP1O14713 200 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 LANCL1O43813 399 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 CD74P04233 296 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 SFTPBP07988 381 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 CD3GP09693 182 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 HNF1AP20823 631 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 GNLYP22749 145 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 CA6P23280 308 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 CHATP28329 748 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 BTCP35070 178 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 RFX2P48378 723 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 GPM6AP51674 278 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 ACTBP60709 375 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 ACTG1P63261 375 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 MAB21L1Q13394 359 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 ZNF146Q15072 292 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 KCNJ8Q15842 424 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 SRSF7Q16629 238 aaKnown RBP eCLIP7.1□□□□□ -1.27
VPS29-203ENST00000546588 SPIN3Q5JUX0 258 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 OR10K2Q6IF99 312 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 Q6ZS49 121 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 SNX29P2Q8IUI4 249 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 GAPTQ8N292 157 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 OSR2Q8N2R0 312 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 ZNF843Q8N446 348 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 POC1AQ8NBT0 407 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 BPIFCQ8NFQ6 507 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 Q8TCH9 128 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 ERGIC1Q969X5 290 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 MARC2Q969Z3 335 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 SEH1LQ96EE3 360 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 NKX3-1Q99801 234 aaPredicted RBP7.1□□□□□ -1.27
VPS29-203ENST00000546588 C1QTNF6Q9BXI9 259 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 MFFQ9GZY8 342 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 CXXC4Q9H2H0 198 aa7.1□□□□□ -1.27
VPS29-203ENST00000546588 SEPSECSQ9HD40 501 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms