RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 FAM90A22PA8MWA6 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A12PA8MX19 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A5PA8MXJ8 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A23PA8MXZ1 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 SLC33A1O00400 549 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 HSPB6O14558 160 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 SH2D1BO14796 132 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 GEMIN2O14893 280 aaKnown RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 ENSAO43768 121 aaKnown RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 CD5LO43866 347 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 TK1P04183 234 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 CHRM2P08172 466 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A15PP0C7V4 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A13PP0C7W8 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A14PP0C7W9 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM90A24PP0C7X0 464 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 SLC2A2P11168 524 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 NDUFB7P17568 137 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 ZFP36P26651 326 aaKnown RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 OR3A1P47881 315 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 TMBIM6P55061 237 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 RPS27AP62979 156 aaKnown RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 QRFPP83859 136 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 BLMHQ13867 455 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 EDDM3AQ14507 147 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 ATXN7L3Q14CW9 347 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 TAF9Q16594 264 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 PAN3Q58A45 887 aaKnown RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 Q6P435 159 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 ZNF841Q6ZN19 808 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 C17orf107Q6ZR85 190 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 USP43Q70EL4 1123 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 BIVMQ86UB2 503 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 BCL6BQ8N143 479 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 OR4M2Q8NGB6 313 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 OR51D1Q8NGF3 324 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 PPP1R35Q8TAP8 253 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 H1FXQ92522 213 aaKnown RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 TRIM63Q969Q1 353 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 SLC25A46Q96AG3 418 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM186Q96B77 213 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 ISOC1Q96CN7 298 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 C16orf92Q96LL3 132 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 NICN1Q9BSH3 213 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 FAM234AQ9H0X4 552 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 RBM38Q9H0Z9 239 aaKnown RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 DCSTAMPQ9H295 470 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 IFT22Q9H7X7 185 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 SEBOXQ9HB31 216 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 SPACA1Q9HBV2 294 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 ZNF581Q9P0T4 197 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 RCC2Q9P258 522 aaKnown RBP5.23□□□□□ -1.57
PRKDC-211ENST00000546304 C2CD3Q4AC94 2353 aa5.23□□□□□ -1.57
PRKDC-211ENST00000546304 LOC105371242A0A075B767 164 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 A0A0A6YYD4 124 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 TRAV24A0A0B4J272 114 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 PPIAL4CA0A0B4J2A2 164 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 A0A1W2PQ09 198 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 CCDC160A6NGH7 325 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 H3BMQ9 156 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 K7N7A8 449 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 DEGS1O15121 323 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 LDLRAD4O15165 306 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 TMEM127O75204 238 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 PDCD6O75340 191 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 ECDO95905 644 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-211ENST00000546304 TGFAP01135 160 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 CSN2P05814 226 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 LMO1P25800 156 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 RPS19P39019 145 aaKnown RBP5.22□□□□□ -1.57
PRKDC-211ENST00000546304 KCNJ3P48549 501 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 DVL1P1P54792 670 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-211ENST00000546304 P2RX3P56373 397 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 EDDM3BP56851 147 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 SCAND1P57086 179 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 SCN1BQ07699 218 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 PLA2G7Q13093 441 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 SPCS2Q15005 226 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 PDCD1Q15116 288 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 GRK1Q15835 563 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 IDNKQ5T6J7 187 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 DCAF12L2Q5VW00 463 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 CYB5R2Q6BCY4 276 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 CLEC9AQ6UXN8 241 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 BTN2A1Q7KYR7 527 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 GDPD3Q7L5L3 318 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 CROCCP3Q8IVE0 287 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 OR4S1Q8NGB4 309 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 C8orf46Q8TAG6 207 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 NEK7Q8TDX7 302 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 SNX22Q96L94 193 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 SMR3AQ99954 134 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 DCTN5Q9BTE1 182 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 URM1Q9BTM9 101 aaKnown RBP5.22□□□□□ -1.57
PRKDC-211ENST00000546304 MRI1Q9BV20 369 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 DPCDQ9BVM2 203 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-211ENST00000546304 TM2D1Q9BX74 207 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 LPAR5Q9H1C0 372 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 C19orf12Q9NSK7 152 aa5.22□□□□□ -1.57
PRKDC-211ENST00000546304 HIF1ANQ9NWT6 349 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms