RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CD83Q01151 205 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 MADCAM1Q13477 382 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 Q499Y3 187 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 YIF1BQ5BJH7 314 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 NHLRC3Q5JS37 347 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 KPRPQ5T749 579 aaPredicted RBP7.49□□□□□ -1.21
YBX3-218ENST00000546298 DDI2Q5TDH0 399 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 SAMD5Q5TGI4 173 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 RSBN1Q5VWQ0 802 aaPredicted RBP7.49□□□□□ -1.21
YBX3-218ENST00000546298 XAF1Q6GPH4 301 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 BAIAP2L2Q6UXY1 529 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 Q6ZS46 218 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 REC114Q7Z4M0 266 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 LYG1Q8N1E2 194 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 SUMF2Q8NBJ7 301 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 OR13A1Q8NGR1 328 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 OR10K1Q8NGX5 313 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 OR52N1Q8NH53 320 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 MRGPRDQ8TDS7 321 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 GHSRQ92847 366 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 TOMM40LQ969M1 308 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 IFT22Q9H7X7 185 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 RAB9BQ9NP90 201 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 ST3GAL6Q9Y274 331 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 TRBV5-5A0A0J9YX44 114 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 TCRBV4S1A1TA0A5B7 111 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 NPIPB11E5RHQ5 1161 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 CD24P25063 80 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 RAB7AP51149 207 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 RBM11P57052 281 aaKnown RBP7.48□□□□□ -1.21
YBX3-218ENST00000546298 LRRC36Q1X8D7 754 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 MPV17LQ2QL34 196 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 BEAN1Q3B7T3 259 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 PIGYQ3MUY2 71 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 ABCA11PQ4W5N1 156 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 ATAD3CQ5T2N8 411 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 DMKNQ6E0U4 476 aaPredicted RBP7.48□□□□□ -1.21
YBX3-218ENST00000546298 OR8H3Q8N146 312 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 STX19Q8N4C7 294 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 OR4X2Q8NGF9 303 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 RFESDQ8TAC1 157 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 PLPPR1Q8TBJ4 325 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 NEK7Q8TDX7 302 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 THRSPQ92748 146 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 ZNF184Q99676 751 aaPredicted RBP7.48□□□□□ -1.21
YBX3-218ENST00000546298 SPACA1Q9HBV2 294 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 PSG11Q9UQ72 335 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 MOB4Q9Y3A3 225 aa7.48□□□□□ -1.21
YBX3-218ENST00000546298 SIRT4Q9Y6E7 314 aaPredicted RBP7.48□□□□□ -1.21
YBX3-218ENST00000546298 FAM90A18PA6NE21 464 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 FAM90A16PA6NEW6 464 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 FAM90A20PA6NIJ5 464 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 FAM90A9PA6NNJ1 464 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 FAM90A12PA8MX19 464 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 FAM90A5PA8MXJ8 464 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 G3V4G9 280 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 GEMIN2O14893 280 aaKnown RBP7.47□□□□□ -1.21
YBX3-218ENST00000546298 ORC5O43913 435 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 CLIC3O95833 236 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 LPLP06858 475 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 FAM90A15PP0C7V4 464 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 FAM90A13PP0C7W8 464 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 FAM90A14PP0C7W9 464 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 FAM90A24PP0C7X0 464 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 PF4V1P10720 104 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 IGFBP3P17936 291 aaPredicted RBP7.47□□□□□ -1.21
YBX3-218ENST00000546298 SERPINA2P20848 420 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 IL3RAP26951 378 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 ADARB1P78563 741 aaKnown RBP7.47□□□□□ -1.21
YBX3-218ENST00000546298 ST3GAL4Q11206 333 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 HES1Q14469 280 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 LTC4SQ16873 150 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 TMEM95Q3KNT9 176 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 SLC22A6Q4U2R8 563 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 C9orf152Q5JTZ5 239 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 HIST2H2BDQ6DRA6 164 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 CDH26Q8IXH8 852 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 C8orf59Q8N0T1 100 aaPredicted RBP7.47□□□□□ -1.21
YBX3-218ENST00000546298 OR52M1Q8NGK5 317 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 OR10X1Q8NGY0 326 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 GGHQ92820 318 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 ARL11Q969Q4 196 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 MRPS24Q96EL2 167 aaKnown RBP7.47□□□□□ -1.21
YBX3-218ENST00000546298 CNOT2Q9NZN8 540 aaKnown RBP7.47□□□□□ -1.21
YBX3-218ENST00000546298 CLEC2DQ9UHP7 191 aa7.47□□□□□ -1.21
YBX3-218ENST00000546298 TSSC4Q9Y5U2 329 aaPredicted RBP7.47□□□□□ -1.21
YBX3-218ENST00000546298 A0A1W2PRX2 142 aa7.46□□□□□ -1.22
YBX3-218ENST00000546298 ADARB2-AS1A8MUL3 147 aa7.46□□□□□ -1.22
YBX3-218ENST00000546298 MCRIP1C9JLW8 97 aa7.46□□□□□ -1.22
YBX3-218ENST00000546298 MYL12BO14950 172 aa7.46□□□□□ -1.22
YBX3-218ENST00000546298 FGF16O43320 207 aa7.46□□□□□ -1.22
YBX3-218ENST00000546298 IGHV3-7P01780 117 aa7.46□□□□□ -1.22
YBX3-218ENST00000546298 GAPDHP04406 335 aaKnown RBP7.46□□□□□ -1.22
YBX3-218ENST00000546298 CD1AP06126 327 aa7.46□□□□□ -1.22
YBX3-218ENST00000546298 SNRNP70P08621 437 aaKnown RBP7.46□□□□□ -1.22
YBX3-218ENST00000546298 TMEM11P17152 192 aa7.46□□□□□ -1.22
YBX3-218ENST00000546298 FSTP19883 344 aa7.46□□□□□ -1.22
YBX3-218ENST00000546298 CD33P20138 364 aa7.46□□□□□ -1.22
YBX3-218ENST00000546298 MAPK3P27361 379 aaPredicted RBP7.46□□□□□ -1.22
YBX3-218ENST00000546298 SSTR5P35346 364 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms