RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CT55Q8WUE5 264 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 HIST1H2BAQ96A08 127 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 RBMXL1Q96E39 390 aaKnown RBP8.51□□□□□ -1.05
TRAF1-203ENST00000546084 PLK3Q9H4B4 646 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 AURKAIP1Q9NWT8 199 aaPredicted RBP8.51□□□□□ -1.05
TRAF1-203ENST00000546084 CD300LBA8K4G0 201 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 ADAM20O43506 726 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 NPIPB7O75200 414 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 AGFG2O95081 481 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 CD37P11049 281 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 LIFP15018 202 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 IL2RGP31785 369 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 EDDM3BP56851 147 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 ZNF816Q0VGE8 651 aaPredicted RBP8.51□□□□□ -1.05
TRAF1-203ENST00000546084 SOHLH1Q5JUK2 328 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 OR2Y1Q8NGV0 311 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 SAP25Q8TEE9 199 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 SH3BGRL3Q9H299 93 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 ANXA10Q9UJ72 324 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 NSG2Q9Y328 171 aa8.51□□□□□ -1.05
TRAF1-203ENST00000546084 MGAQ8IWI9 3026 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 EML6Q6ZMW3 1958 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 A0A087X0M5 115 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 A0A1B0GX30 115 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 COLCA2A8K830 154 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 ZNF724A8MTY0 619 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 IFNA5P01569 189 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 MT-ND4LP03901 98 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 FBP1P09467 338 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 SCTP09683 121 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 BCL3P20749 454 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 PTGER4P35408 488 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 GSK3AP49840 483 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 RAB11AP62491 216 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 MST1LQ2TV78 715 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 DEGS2Q6QHC5 323 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 C15orf54Q8N8G6 183 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 CCDC54Q8NEL0 328 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 CCL28Q9NRJ3 127 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 A0A1W2PPE3 182 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 MFNGO00587 321 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 TGOLN2O43493 480 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 TAS2R60P59551 318 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 SRSF4Q08170 494 aaKnown RBP8.5□□□□□ -1.05
TRAF1-203ENST00000546084 RPUSD3Q6P087 351 aaKnown RBP8.5□□□□□ -1.05
TRAF1-203ENST00000546084 HAS2Q92819 552 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 AQP10Q96PS8 301 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 TMEM100Q9NV29 134 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 KLF2Q9Y5W3 355 aaPredicted RBP8.5□□□□□ -1.05
TRAF1-203ENST00000546084 SPTBN4Q9H254 2564 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 NKX2-6A6NCS4 301 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 MSTNO14793 375 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 OPN1MWP04001 364 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 OPN1MW2P0DN77 364 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 OPN1MW3P0DN78 364 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 HKR1P10072 659 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 NDUFA6P56556 154 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 RAC1P63000 192 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 PRDX4Q13162 271 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 KMT5CQ86Y97 462 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 CALHM1Q8IU99 346 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 OR52M1Q8NGK5 317 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 ERGIC1Q969X5 290 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 ZPBPQ9BS86 351 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 RTBDNQ9BSG5 229 aaPredicted RBP8.5□□□□□ -1.05
TRAF1-203ENST00000546084 PBDC1Q9BVG4 233 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 NCOR1P1Q9H4R4 102 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 SLC2A9Q9NRM0 540 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 STARD10Q9Y365 291 aa8.5□□□□□ -1.05
TRAF1-203ENST00000546084 CHCHD2Q9Y6H1 151 aaPredicted RBP8.5□□□□□ -1.05
TRAF1-203ENST00000546084 MAP1AP78559 2803 aaPredicted RBP8.49□□□□□ -1.05
TRAF1-203ENST00000546084 TMEM14DPA8MWL7 114 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 DEGS1O15121 323 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 SYNGR1O43759 233 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 METTL15P1P0C7V9 234 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 MPLP40238 635 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 SULT1A2P50226 295 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 SUPT4H1P63272 117 aaKnown RBP8.49□□□□□ -1.05
TRAF1-203ENST00000546084 SPEM2Q0P670 501 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 KIAA0141Q14154 515 aaPredicted RBP8.49□□□□□ -1.05
TRAF1-203ENST00000546084 LGI3Q8N145 548 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 TRIB1Q96RU8 372 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 FAM208BQ5VWN6 2430 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 SHISA7A6NL88 538 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 VAMP5O95183 116 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 IFNA17P01571 189 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 H2AFB1P0C5Y9 115 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 PNLIPRP3Q17RR3 467 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 CXorf66Q5JRM2 361 aaPredicted RBP8.49□□□□□ -1.05
TRAF1-203ENST00000546084 BTNL3Q6UXE8 466 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 CCDC71LQ8N9Z2 235 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 NFAM1Q8NET5 270 aaPredicted RBP8.49□□□□□ -1.05
TRAF1-203ENST00000546084 OR5C1Q8NGR4 320 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 SMIM8Q96KF7 97 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 OCSTAMPQ9BR26 566 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 TIMM8BQ9Y5J9 83 aaPredicted RBP8.49□□□□□ -1.05
TRAF1-203ENST00000546084 CDIPTO14735 213 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 OR2C1O95371 312 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 ZNF708P17019 499 aa8.49□□□□□ -1.05
TRAF1-203ENST00000546084 RAB5AP20339 215 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms