RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 RAB32Q13637 225 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 C1QTNF12Q5T7M4 302 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 ZNF497Q6ZNH5 498 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 LGI3Q8N145 548 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 LRTM2Q8N967 370 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 OR10J5Q8NHC4 309 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 MRPL24Q96A35 216 aaKnown RBP14.07□□□□□ -0.16
CHFR-224ENST00000545046 SLC5A7Q9GZV3 580 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 TLNRD1Q9H1K6 362 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 OR14J1Q9UGF5 321 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 KIF25Q9UIL4 384 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 IGKV1-6A0A0C4DH72 117 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 LEUTXA8MZ59 168 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 MPPED1O15442 326 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 PHF1O43189 567 aaPredicted RBP14.07□□□□□ -0.16
CHFR-224ENST00000545046 TUSC2O75896 110 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 HAND1O96004 215 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 LYL1P12980 280 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 GNRHRP30968 328 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 PRAMEF6Q5VXH4 476 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 ZNF826PQ6ZT77 177 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 PLPPR1Q8TBJ4 325 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 ARPC5LQ9BPX5 153 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 TRAPPC2LQ9UL33 140 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 BOD1L1Q8NFC6 3051 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 APC2O95996 2303 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 DSPP15924 2871 aaKnown RBP14.07□□□□□ -0.16
CHFR-224ENST00000545046 C3orf85A0A1B0GTC6 90 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 H0YIZ8 118 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 GPR31O00270 319 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 S100A10P60903 97 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 GLYATL2Q8WU03 294 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 ST8SIA2Q92186 375 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 ZNF471Q9BX82 626 aaPredicted RBP14.06□□□□□ -0.16
CHFR-224ENST00000545046 UFSP2Q9NUQ7 469 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 DUSP13Q9UII6 198 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 ANKRD11Q6UB99 2663 aaPredicted RBP14.06□□□□□ -0.16
CHFR-224ENST00000545046 KCNJ3P48549 501 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 RND3P61587 244 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 FAM27E3Q08E93 113 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 ESCO2Q56NI9 601 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 WDR82Q6UXN9 313 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 CABLES2Q9BTV7 478 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 OR5AC2Q9NZP5 309 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 TAAR3PQ9P1P4 343 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 TUBD1Q9UJT1 453 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 AUP1Q9Y679 476 aa14.06□□□□□ -0.16
CHFR-224ENST00000545046 A0A0G2JNJ9 132 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 A0A1B0GWJ7 208 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 SPTBN2O15020 2390 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 RLN2P04090 185 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 ZNF250P15622 560 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 GLRXP35754 106 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 TMPRSS3P57727 454 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 SRPXP78539 464 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 ACACAQ13085 2346 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 SMCO1Q147U7 214 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 PCSK4Q6UW60 755 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 ACP7Q6ZNF0 438 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 MRGPRGQ86SM5 289 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 ZGRF1Q86YA3 2104 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 OR2Z1Q8NG97 314 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 MSI2Q96DH6 328 aaKnown RBP14.05□□□□□ -0.16
CHFR-224ENST00000545046 KIRREL1Q96J84 757 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 C18orf12Q96KH6 178 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 Q9UFV3 132 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 hCG_1807616A0A1W2PRN6 198 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 F5H0A9 414 aaPredicted RBP14.05□□□□□ -0.16
CHFR-224ENST00000545046 WNT9BO14905 357 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 KCNAB3O43448 404 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 ZNF818PQ6ZRF7 136 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 LYZL2Q7Z4W2 148 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 TBC1D26Q86UD7 250 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 LDLRAD3Q86YD5 345 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 CMTM1Q8IZ96 169 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 CNTNAP3BQ96NU0 1288 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 CNTNAP3Q9BZ76 1288 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 DNAJB11Q9UBS4 358 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 OR2W1Q9Y3N9 320 aa14.05□□□□□ -0.16
CHFR-224ENST00000545046 SPENQ96T58 3664 aaKnown RBP14.04□□□□□ -0.16
CHFR-224ENST00000545046 IGKV1D-13A0A0B4J2D9 117 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 IGHV3-13P01766 116 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 IGKV1-13P0DP09 117 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 LMO1P25800 156 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 S100GP29377 79 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 LUMP51884 338 aaPredicted RBP14.04□□□□□ -0.16
CHFR-224ENST00000545046 KLF3P57682 345 aaPredicted RBP14.04□□□□□ -0.16
CHFR-224ENST00000545046 RPS23P62266 143 aaKnown RBP14.04□□□□□ -0.16
CHFR-224ENST00000545046 COMMD7Q86VX2 200 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 LRP11Q86VZ4 500 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 FOXRED2Q8IWF2 684 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 H1FOOQ8IZA3 346 aaPredicted RBP14.04□□□□□ -0.16
CHFR-224ENST00000545046 GAPTQ8N292 157 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 IL1F10Q8WWZ1 152 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 SNRNP40Q96DI7 357 aaKnown RBP14.04□□□□□ -0.16
CHFR-224ENST00000545046 TP53RKQ96S44 253 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 UBE2J1Q9Y385 318 aaPredicted RBP14.04□□□□□ -0.16
CHFR-224ENST00000545046 WIPI2Q9Y4P8 454 aa14.04□□□□□ -0.16
CHFR-224ENST00000545046 HSD17B6O14756 317 aa14.03□□□□□ -0.16
CHFR-224ENST00000545046 CEBPDP49716 269 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms