RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 OR52W1Q6IF63 320 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 CCBE1Q6UXH8 406 aaPredicted RBP9.22□□□□□ -0.93
YBX3-216ENST00000544622 CEACAM19Q7Z692 300 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 TRAPPC6BQ86SZ2 158 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 GAPTQ8N292 157 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 ABHD12Q8N2K0 398 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 JAGN1Q8N5M9 183 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 TMEM104Q8NE00 496 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 PHYHIPQ92561 330 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 UFD1Q92890 307 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 KIRREL1Q96J84 757 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 S100A13Q99584 98 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 TMED9Q9BVK6 235 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 GHRLQ9UBU3 117 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 KIF25Q9UIL4 384 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 KIAA2026Q5HYC2 2103 aa9.22□□□□□ -0.93
YBX3-216ENST00000544622 VWFP04275 2813 aa9.21□□□□□ -0.93
YBX3-216ENST00000544622 CMYA5Q8N3K9 4069 aa9.21□□□□□ -0.93
YBX3-216ENST00000544622 MEIKINA0A087WXM9 373 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A10PA6NDY2 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A18PA6NE21 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A16PA6NEW6 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A20PA6NIJ5 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A7PA6NKC0 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A22PA8MWA6 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A12PA8MX19 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A5PA8MXJ8 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A23PA8MXZ1 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 LY6LH3BQJ8 138 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 HSPB6O14558 160 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A15PP0C7V4 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A13PP0C7W8 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A14PP0C7W9 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A24PP0C7X0 464 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 MAP2K4P45985 399 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 RAB13P51153 203 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 KRTAP10-3P60369 221 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 TBCEQ15813 527 aaPredicted RBP9.21□□□□□ -0.94
YBX3-216ENST00000544622 C1orf100Q5SVJ3 147 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 AWAT2Q6E213 333 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 SIGIRRQ6IA17 410 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 BRICD5Q6PL45 260 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 SGMS2Q8NHU3 365 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 WFDC12Q8WWY7 111 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FOXRED1Q96CU9 486 aaPredicted RBP9.21□□□□□ -0.94
YBX3-216ENST00000544622 MGLLQ99685 303 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 CITED1Q99966 193 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 ZNF286AQ9HBT8 521 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 FBLN5Q9UBX5 448 aa9.21□□□□□ -0.94
YBX3-216ENST00000544622 A6NDX4 124 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 C15orf65H3BRN8 121 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 BUB1B-PAK6H3BSN5 160 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 IL1AP01583 271 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 MT-ND4P03905 459 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 GZMHP20718 246 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 HTR1DP28221 377 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 KIR2DS4P43632 304 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 RPS25P62851 125 aaKnown RBP9.2□□□□□ -0.94
YBX3-216ENST00000544622 QRFPP83859 136 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 EMX1Q04741 257 aaPredicted RBP9.2□□□□□ -0.94
YBX3-216ENST00000544622 DYNC1I2Q13409 638 aaKnown RBP9.2□□□□□ -0.94
YBX3-216ENST00000544622 TRAM1Q15629 374 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 HSD17B12Q53GQ0 312 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 PRR31Q5SQ13 230 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 GLT8D1Q68CQ7 371 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 DHRS7BQ6IAN0 325 aaPredicted RBP9.2□□□□□ -0.94
YBX3-216ENST00000544622 ZNF497Q6ZNH5 498 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 LIAT1Q6ZQX7 453 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 OR10A7Q8NGE5 316 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 ZNF596Q8TC21 504 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 TMEM203Q969S6 136 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 Q96M66 194 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 GFI1Q99684 422 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 CCDC90BQ9GZT6 254 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 ZNF696Q9H7X3 374 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 SPACA1Q9HBV2 294 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 TCF7L1Q9HCS4 588 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 ACOT13Q9NPJ3 140 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 ING3Q9NXR8 418 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 CALYQ9NYX4 217 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 DPM3Q9P2X0 92 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 TCF19Q9Y242 345 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 RNF114Q9Y508 228 aa9.2□□□□□ -0.94
YBX3-216ENST00000544622 SLC22A1O15245 554 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 CHST1O43916 411 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 MRPS14O60783 128 aaKnown RBP9.19□□□□□ -0.94
YBX3-216ENST00000544622 GLAP06280 429 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 HSMCR30P0CW71 290 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 VSIG8P0DPA2 414 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 MGMTP16455 207 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 JUNBP17275 347 aaPredicted RBP9.19□□□□□ -0.94
YBX3-216ENST00000544622 PSMA1P25786 263 aaKnown RBP9.19□□□□□ -0.94
YBX3-216ENST00000544622 FABP5Q01469 135 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 SRSF4Q08170 494 aaKnown RBP9.19□□□□□ -0.94
YBX3-216ENST00000544622 FAM189A2Q15884 450 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 SSX1Q16384 188 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 LY6EQ16553 131 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 HLA-DRB5Q30154 266 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 CD200R1LQ6Q8B3 271 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 SLC16A12Q6ZSM3 486 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms