RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 MLIPQ5VWP3 458 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 KCTD16Q68DU8 428 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 ZNF660Q6AZW8 331 aaPredicted RBP0.97□□□□□ -2.25
YBX3-214ENST00000544501 CLEC18BQ6UXF7 455 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 FAM231DQ6ZW35 169 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 SMIM5Q71RC9 77 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 TMCO2Q7Z6W1 182 aaPredicted RBP0.97□□□□□ -2.25
YBX3-214ENST00000544501 COMTD1Q86VU5 262 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 ITPRIPQ8IWB1 547 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 C3orf22Q8N5N4 141 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 ZDHHC22Q8N966 263 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 ACTL9Q8TC94 416 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 ING5Q8WYH8 240 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 ISG20Q96AZ6 181 aaKnown RBP0.97□□□□□ -2.25
YBX3-214ENST00000544501 TSNAXQ99598 290 aaKnown RBP0.97□□□□□ -2.25
YBX3-214ENST00000544501 GABRG3Q99928 467 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 MRPL20Q9BYC9 149 aaKnown RBP0.97□□□□□ -2.25
YBX3-214ENST00000544501 IL22Q9GZX6 179 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 PARP11Q9NR21 331 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 PRO0628Q9UI54 55 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 SLC7A11Q9UPY5 501 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 TRAPPC1Q9Y5R8 145 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 ANK2Q01484 3957 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 CENPEQ02224 2701 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 A0A0G2JMZ2 1700 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 CELSR2Q9HCU4 2923 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 SCN7AQ01118 1682 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 CEP162Q5TB80 1403 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 UTP20O75691 2785 aaKnown RBP0.96□□□□□ -2.25
YBX3-214ENST00000544501 CPDO75976 1380 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 KIF24Q5T7B8 1368 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 KIF1BO60333 1816 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 PPLO60437 1756 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 PHLPP2Q6ZVD8 1323 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 WDR19Q8NEZ3 1342 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 IGLV10-54A0A075B6I4 117 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 IGKV1OR2-108A0A075B7D4 117 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 H7C2Y5 167 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 AKR7A2O43488 359 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 GATCO43716 136 aaKnown RBP0.96□□□□□ -2.26
YBX3-214ENST00000544501 ENTPD6O75354 484 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 KRTAP5-8O75690 187 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 TRAPPC6AO75865 159 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 PTTG1O95997 202 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 CXorf1O96002 111 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 IGHV3-53P01767 116 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 OR5AL1P0C617 328 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 PTHLHP12272 177 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 MSR1P21757 451 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 PAX6P26367 422 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 IVDP26440 423 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 PSMD4P55036 377 aaKnown RBP0.96□□□□□ -2.26
YBX3-214ENST00000544501 FOXA1P55317 472 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 TAS2R60P59551 318 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 PSMC5P62195 406 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 FMODQ06828 376 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 ENDOGQ14249 297 aaKnown RBP0.96□□□□□ -2.26
YBX3-214ENST00000544501 ELOCQ15369 112 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 PDZD11Q5EBL8 140 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 TTC32Q5I0X7 151 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 LIN9Q5TKA1 542 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 SPNS3Q6ZMD2 512 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 TMPPEQ6ZT21 453 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 TMEM144Q7Z5S9 345 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 VTCN1Q7Z7D3 282 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 CPNE9Q8IYJ1 553 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 ZNF555Q8NEP9 628 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 OR5T3Q8NGG3 340 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 BAALCQ8WXS3 180 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 PEX13Q92968 403 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 RBPMSQ93062 196 aaKnown RBP0.96□□□□□ -2.26
YBX3-214ENST00000544501 CERS2Q96G23 380 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 PPP1R36Q96LQ0 422 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 IGF2BP2-AS1Q96M15 143 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 SPACA5Q96QH8 159 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 STACQ99469 402 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 BLZF1Q9H2G9 400 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 CHRAC1Q9NRG0 131 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 TMEM38BQ9NVV0 291 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 NLE1Q9NVX2 485 aaPredicted RBP0.96□□□□□ -2.26
YBX3-214ENST00000544501 RBM22Q9NW64 420 aaKnown RBP eCLIP0.96□□□□□ -2.26
YBX3-214ENST00000544501 TAC3Q9UHF0 121 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 RHBDD3Q9Y3P4 386 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 RAB3GAP2Q9H2M9 1393 aa0.96□□□□□ -2.26
YBX3-214ENST00000544501 OTOGLQ3ZCN5 2332 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 VWFP04275 2813 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 MEGF8Q7Z7M0 2845 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 FAM208AQ9UK61 1670 aaKnown RBP0.95□□□□□ -2.26
YBX3-214ENST00000544501 LTBP2Q14767 1821 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 SLC31A1O15431 190 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 PSCAO43653 123 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 CDK1P06493 297 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 SFTPCP11686 197 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 GNRHRP30968 328 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 CFHR2P36980 270 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 MLF1P58340 268 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 RPL10AP62906 217 aaKnown RBP0.95□□□□□ -2.26
YBX3-214ENST00000544501 SLC35B1P78383 322 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 PMVKQ15126 192 aa0.95□□□□□ -2.26
YBX3-214ENST00000544501 ATP6AP1LQ52LC2 224 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms