RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 COMMD1Q8N668 190 aa11.18□□□□□ -0.62
CHD4-211ENST00000544484 SLC24A4Q8NFF2 622 aa11.18□□□□□ -0.62
CHD4-211ENST00000544484 SAP25Q8TEE9 199 aa11.18□□□□□ -0.62
CHD4-211ENST00000544484 TRAPPC1Q9Y5R8 145 aa11.18□□□□□ -0.62
CHD4-211ENST00000544484 CNOT1A5YKK6 2376 aaKnown RBP11.18□□□□□ -0.62
CHD4-211ENST00000544484 G6PCP35575 357 aa11.18□□□□□ -0.62
CHD4-211ENST00000544484 CD200P41217 278 aa11.18□□□□□ -0.62
CHD4-211ENST00000544484 UQCC3Q6UW78 93 aa11.18□□□□□ -0.62
CHD4-211ENST00000544484 OPN3Q9H1Y3 402 aaPredicted RBP11.18□□□□□ -0.62
CHD4-211ENST00000544484 TNS1Q9HBL0 1735 aaKnown RBP11.18□□□□□ -0.62
CHD4-211ENST00000544484 KCNE5Q9UJ90 142 aa11.18□□□□□ -0.62
CHD4-211ENST00000544484 GZMHP20718 246 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 ZP3P21754 424 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 VDAC1P21796 283 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 KLF9Q13886 244 aaPredicted RBP11.17□□□□□ -0.62
CHD4-211ENST00000544484 SLC35B3Q9H1N7 401 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 LIMS1P48059 325 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 REG1BP48304 166 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 CLRN3Q8NCR9 226 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 NAGKQ9UJ70 344 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 NKX2-6A6NCS4 301 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 GNG4P50150 75 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 FAHD2BQ6P2I3 314 aaPredicted RBP11.17□□□□□ -0.62
CHD4-211ENST00000544484 SLC25A42Q86VD7 318 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 OR1K1Q8NGR3 316 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 ADAMTS17Q8TE56 1095 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 DTD1Q8TEA8 209 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 FAHD2AQ96GK7 314 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 ZNF665Q9H7R5 613 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 HS3ST3B1Q9Y662 390 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 BRWD3Q6RI45 1802 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 C17orf51A8MQB3 221 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 HMSDA8MTL9 139 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 ANKRD34CP0C6C1 535 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 SURF2Q15527 256 aaPredicted RBP11.17□□□□□ -0.62
CHD4-211ENST00000544484 MPV17LQ2QL34 196 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 ATP1A1-AS1Q5TC04 95 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 SLC23A3Q6PIS1 610 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 MRPS18AQ9NVS2 196 aaKnown RBP11.17□□□□□ -0.62
CHD4-211ENST00000544484 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 A0A1W2PNV4 684 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 A0A1W2PQM1 296 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 SH2D7A6NKC9 451 aaPredicted RBP11.17□□□□□ -0.62
CHD4-211ENST00000544484 PHOX2AO14813 284 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 DNPH1O43598 174 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 GALR1P47211 349 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 HLA-DRB3P79483 266 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 FAM27BQ5VT28 67 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 THYN1Q9P016 225 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 PILRBQ9UKJ0 227 aa11.17□□□□□ -0.62
CHD4-211ENST00000544484 PCDHGA9Q9Y5G4 932 aaKnown RBP11.17□□□□□ -0.62
CHD4-211ENST00000544484 IGKV3-7A0A075B6H7 116 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 TGOLN2O43493 480 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 PPP1CCP36873 323 aaKnown RBP11.16□□□□□ -0.62
CHD4-211ENST00000544484 IL24Q13007 206 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 ADTRPQ96IZ2 230 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 COA4Q9NYJ1 87 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 LIPGQ9Y5X9 500 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 IGF2P01344 180 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 SPP1P10451 314 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 STARD6P59095 220 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 TGIF2LYQ8IUE0 185 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 FGF11Q92914 225 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 LURAP1Q96LR2 239 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 MS4A5Q9H3V2 200 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 SH2D2AQ9NP31 389 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 OPN4Q9UHM6 478 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 GOLT1BQ9Y3E0 138 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 TET1Q8NFU7 2136 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 KLK13Q9UKR3 277 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 OR2W1Q9Y3N9 320 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 NGFRP08138 427 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 UBE2L3P68036 154 aaKnown RBP11.16□□□□□ -0.62
CHD4-211ENST00000544484 ZP4Q12836 540 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 ZNF441Q8N8Z8 693 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 ANGPTL4Q9BY76 406 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 INSIG2Q9Y5U4 225 aa11.16□□□□□ -0.62
CHD4-211ENST00000544484 LMX1BO60663 402 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 PSG2P11465 335 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 RNF122Q9H9V4 155 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 PRSS50Q9UI38 385 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 A0A1W2PPC1 479 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 KCNAB3O43448 404 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 GGTLC2Q14390 218 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 OR52L2PQ8NGH6 319 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 VSTM2AQ8TAG5 236 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 RPL36A-HNRNPH2H7BZ11 118 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 CLDN34H7C241 214 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 FGF5P12034 268 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 CDCP2Q5VXM1 449 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 OR10A7Q8NGE5 316 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 HARBI1Q96MB7 349 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 C12orf57Q99622 126 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 F2RL2O00254 374 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 NSUN5P2Q63ZY6 315 aa11.15□□□□□ -0.62
CHD4-211ENST00000544484 KIAA1324LA8MWY0 1029 aaPredicted RBP11.15□□□□□ -0.63
CHD4-211ENST00000544484 COL10A1Q03692 680 aa11.15□□□□□ -0.63
CHD4-211ENST00000544484 FA2HQ7L5A8 372 aa11.15□□□□□ -0.63
CHD4-211ENST00000544484 TMUB1Q9BVT8 246 aa11.15□□□□□ -0.63
CHD4-211ENST00000544484 TMPRSS5Q9H3S3 457 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms