RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 CDRT1O95170 752 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 CLIC3O95833 236 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 LALBAP00709 142 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 ALDOBP05062 364 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 CEACAM3P40198 252 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 PRRX1P54821 245 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 DIAPH2-AS1Q14236 149 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 IL13RA2Q14627 380 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 RPL22L1Q6P5R6 122 aaKnown RBP9.42□□□□□ -0.9
GABPB1-206ENST00000543881 OR9G1Q8NH87 305 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 RFESDQ8TAC1 157 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 GPR148Q8TDV2 347 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 GPER1Q99527 375 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 FAM192AQ9GZU8 254 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 NCOR1P1Q9H4R4 102 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 PSG11Q9UQ72 335 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 TSSC4Q9Y5U2 329 aaPredicted RBP9.42□□□□□ -0.9
GABPB1-206ENST00000543881 FAM90A18PA6NE21 464 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 FAM90A16PA6NEW6 464 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 FAM90A20PA6NIJ5 464 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 FAM90A9PA6NNJ1 464 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 FAM90A12PA8MX19 464 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 FAM90A5PA8MXJ8 464 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 NPIPB11E5RHQ5 1161 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 H3BUI4 141 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 J3QR06 171 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 MAGEB3O15480 346 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 HTR3BO95264 441 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 IL1AP01583 271 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 FAM90A15PP0C7V4 464 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 FAM90A13PP0C7W8 464 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 FAM90A14PP0C7W9 464 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 FAM90A24PP0C7X0 464 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 SSTR5P35346 364 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 PAX5Q02548 391 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 RSU1Q15404 277 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 LTC4SQ16873 150 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 CCDC58Q4VC31 144 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 CENPVQ7Z7K6 275 aaPredicted RBP9.41□□□□□ -0.9
GABPB1-206ENST00000543881 ZNF565Q8N9K5 539 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 OR13C5Q8NGS8 318 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 HAVCR2Q8TDQ0 301 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 MRGPRDQ8TDS7 321 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 TMEM106AQ96A25 262 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 CREB3L1Q96BA8 519 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 AKR1E2Q96JD6 320 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 BARHL1Q9BZE3 327 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 BATF3Q9NR55 127 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 SMPD3Q9NY59 655 aaPredicted RBP9.41□□□□□ -0.9
GABPB1-206ENST00000543881 IDI2-AS1Q9NZ38 188 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 CLEC2DQ9UHP7 191 aa9.41□□□□□ -0.9
GABPB1-206ENST00000543881 A0A1W2PPI3 338 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 OOSP1A8MZH6 123 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 OGG1O15527 345 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 BAG2O95816 211 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 DCKP27707 260 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 C21orf33P30042 268 aaPredicted RBP9.4□□□□□ -0.9
GABPB1-206ENST00000543881 ARHGDIBP52566 201 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 DCTN2Q13561 401 aaKnown RBP9.4□□□□□ -0.9
GABPB1-206ENST00000543881 SUMF2Q8NBJ7 301 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 CAPSLQ8WWF8 208 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 DPF1Q92782 380 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 MYDGFQ969H8 173 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 CPNE2Q96FN4 548 aaPredicted RBP9.4□□□□□ -0.9
GABPB1-206ENST00000543881 DPCDQ9BVM2 203 aaPredicted RBP9.4□□□□□ -0.9
GABPB1-206ENST00000543881 TMEM138Q9NPI0 162 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 BABAM2Q9NXR7 383 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 ING4Q9UNL4 249 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 ST3GAL6Q9Y274 331 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 U3KQK5 164 aa9.4□□□□□ -0.9
GABPB1-206ENST00000543881 A0A1W2PP11 408 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 MAGEA13PA6NCF6 341 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 GEMIN2O14893 280 aaKnown RBP9.4□□□□□ -0.91
GABPB1-206ENST00000543881 CD2P06729 351 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 SNRNP70P08621 437 aaKnown RBP9.4□□□□□ -0.91
GABPB1-206ENST00000543881 NHLRC4P0CG21 123 aaPredicted RBP9.4□□□□□ -0.91
GABPB1-206ENST00000543881 IGFBP3P17936 291 aaPredicted RBP9.4□□□□□ -0.91
GABPB1-206ENST00000543881 ZNF93P35789 620 aaPredicted RBP9.4□□□□□ -0.91
GABPB1-206ENST00000543881 MNDAP41218 407 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 GNG10P50151 68 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 RBM11P57052 281 aaKnown RBP9.4□□□□□ -0.91
GABPB1-206ENST00000543881 NHLRC3Q5JS37 347 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 DDI2Q5TDH0 399 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 FAM53AQ6NSI3 398 aaPredicted RBP9.4□□□□□ -0.91
GABPB1-206ENST00000543881 CCDC144NLQ6NUI1 221 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 TMPRSS11AQ6ZMR5 421 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 THNSL2Q86YJ6 484 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 OSR2Q8N2R0 312 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 DRAM1Q8N682 238 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 DRAXINQ8NBI3 349 aaPredicted RBP9.4□□□□□ -0.91
GABPB1-206ENST00000543881 ZNF485Q8NCK3 441 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 ZNF555Q8NEP9 628 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 OR56B4Q8NH76 319 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 TOMM40LQ969M1 308 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 RPEQ96AT9 228 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 SMIM19Q96E16 107 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 RDH12Q96NR8 316 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 GPR61Q9BZJ8 451 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 IFT22Q9H7X7 185 aa9.4□□□□□ -0.91
GABPB1-206ENST00000543881 IL36GQ9NZH8 169 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms