RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 SCARB1Q8WTV0 552 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 GATAD1Q8WUU5 269 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 DDB2Q92466 427 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 C12orf43Q96C57 262 aaKnown RBP3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 GRAMD2BQ96HH9 432 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 ZNF479Q96JC4 524 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 GAFA1Q96PS6 74 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 TM2D3Q9BRN9 247 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 ZNF649Q9BS31 505 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 ADAT1Q9BUB4 502 aaKnown RBP3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 ANKRD60Q9BZ19 345 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 C20orf27Q9GZN8 174 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 GAL3ST2Q9H3Q3 398 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 RIMS4Q9H426 269 aaPredicted RBP3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 SLA2Q9H6Q3 261 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 KAT8Q9H7Z6 458 aaKnown RBP3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 Q9H8V8 135 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 AKIP1Q9NQ31 210 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 NKIRAS1Q9NYS0 192 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 PSORS1C1Q9UIG5 152 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 ZNF256Q9Y2P7 627 aaPredicted RBP3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 TMED3Q9Y3Q3 217 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 HERC1Q15751 4861 aa3.81□□□□□ -1.8
NPIPB4-219ENST00000543660 PKHD1P08F94 4074 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 CD300LBA8K4G0 201 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 H7C1C5 153 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 SERPINB7O75635 380 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 ATP5HO75947 161 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 TFF1P04155 84 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 SHBGP04278 402 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 ACSM4P0C7M7 580 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 SMIM18P0DKX4 95 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 ANOS1P23352 680 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 AQP1P29972 269 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 CAV3P56539 151 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 LSM6P62312 80 aaKnown RBP3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 LCN6P62502 163 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 BDH1Q02338 343 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 PAX5Q02548 391 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 SPHARQ15513 63 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 VAMP3Q15836 100 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 C9orf66Q5T8R8 295 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 OR4A47Q6IF82 309 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 FAM71F2Q6NXP2 309 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 WDR82Q6UXN9 313 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 ZNF600Q6ZNG1 722 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 ZNF788Q6ZQV5 615 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 PGAP1Q75T13 922 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 WDR86Q86TI4 376 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 NAA40Q86UY6 237 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 MSRB3Q8IXL7 192 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 SLC7A5P1Q8MH63 180 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 OSR2Q8N2R0 312 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 OR5K1Q8NHB7 308 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 TMEM255BQ8WV15 326 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 LRRC29Q8WV35 223 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 TMEM37Q8WXS4 190 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 GTF2H4Q92759 462 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 MALSU1Q96EH3 234 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 SGTBQ96EQ0 304 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 ITCHQ96J02 903 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 CXorf58Q96LI9 332 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 DUX3Q96PT4 197 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 SAV1Q9H4B6 383 aaPredicted RBP3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 HEXA-AS1Q9H8Q6 139 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 VIPAS39Q9H9C1 493 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 ELL3Q9HB65 397 aaPredicted RBP3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 SPAG4Q9NPE6 437 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 ABCB10Q9NRK6 738 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 VNN3Q9NY84 501 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 SLC25A37Q9NYZ2 338 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 ZNF391Q9UJN7 358 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 NOP16Q9Y3C1 178 aaKnown RBP3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 MUC4Q99102 2169 aa3.8□□□□□ -1.8
NPIPB4-219ENST00000543660 IGLV1-36A0A0B4J1U3 117 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 A6NIZ1 184 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 SMIM23A6NLE4 172 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 ODF3BA8MYP8 253 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 SIGLEC5O15389 551 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 HSPA12AO43301 675 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 BPGMP07738 259 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 ACAA1P09110 424 aaPredicted RBP3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 COX7A1P24310 79 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 SLC6A1P30531 599 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 RBM34P42696 430 aaKnown RBP3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 RPL14P50914 215 aaKnown RBP3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 SLC25A1P53007 311 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 RAP1BP61224 184 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 RAP1AP62834 184 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 ZNF92Q03936 586 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 PNRC1Q12796 327 aaPredicted RBP3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 FHL1Q13642 323 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 ASRGL1Q7L266 308 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 MMD2Q8IY49 270 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 SLC26A10Q8NG04 563 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 OR1M1Q8NGA1 313 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 CCDC124Q96CT7 223 aaKnown RBP3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 MED30Q96HR3 178 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 SORT1Q99523 831 aa3.79□□□□□ -1.8
NPIPB4-219ENST00000543660 PARD6BQ9BYG5 372 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms