RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 MMP9P14780 707 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 ZNF133P52736 654 aaPredicted RBP12.23□□□□□ -0.45
PRAME-214ENST00000543184 SUMO3P55854 103 aaPredicted RBP12.23□□□□□ -0.45
PRAME-214ENST00000543184 IL13RA2Q14627 380 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 HIKESHIQ53FT3 197 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 ZNF880Q6PDB4 577 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 TBC1D26Q86UD7 250 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 DMRTC2Q8IXT2 367 aaPredicted RBP12.23□□□□□ -0.45
PRAME-214ENST00000543184 COMMD1Q8N668 190 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 OR14L1PQ8NHC6 308 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 ABHD5Q8WTS1 349 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 PRDM13Q9H4Q3 707 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 VSIRQ9H7M9 311 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 GNG13Q9P2W3 67 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 IGKV1D-13A0A0B4J2D9 117 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 A0A0U1RQV5 110 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 A0A1W2PR80 420 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 MPPED1O15442 326 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 PPYP01298 95 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 SCTP09683 121 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 IGKV1-13P0DP09 117 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 GNRHRP30968 328 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 RPL23AP62750 156 aaKnown RBP12.23□□□□□ -0.45
PRAME-214ENST00000543184 IGFBP7Q16270 282 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 OR2T2Q6IF00 324 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 FIP1L1Q6UN15 594 aaKnown RBP12.23□□□□□ -0.45
PRAME-214ENST00000543184 ZNF695Q8IW36 515 aa12.23□□□□□ -0.45
PRAME-214ENST00000543184 ZNF587BE7ETH6 402 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 SCAF4O95104 1147 aaKnown RBP12.22□□□□□ -0.45
PRAME-214ENST00000543184 TRGC1P0CF51 173 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 SUCLG1P53597 346 aaKnown RBP12.22□□□□□ -0.45
PRAME-214ENST00000543184 RAB11AP62491 216 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 TMEM267Q0VDI3 215 aaPredicted RBP12.22□□□□□ -0.45
PRAME-214ENST00000543184 KCNMB1Q16558 191 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 ZNF818PQ6ZRF7 136 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 OSR2Q8N2R0 312 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 C14orf144Q96I85 54 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 SUCNR1Q9BXA5 334 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 DEFB126Q9BYW3 111 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 CHST1O43916 411 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 RBP2P50120 134 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 VAMP2P63027 116 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 LCN15Q6UWW0 184 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 RSG1Q9BU20 258 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 CRLF2Q9HC73 371 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 CRIM1Q9NZV1 1036 aa12.22□□□□□ -0.45
PRAME-214ENST00000543184 DOCK11Q5JSL3 2073 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 ZFAND5O76080 213 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 NRASP01111 189 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 PGA5P0DJD9 388 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 CCL3P10147 92 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 CCL2P13500 99 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 RAB1AP62820 205 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 ZNF92Q03936 586 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 C9orf135Q5VTT2 229 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 THNSL2Q86YJ6 484 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 GAPTQ8N292 157 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 UBALD1Q8TB05 177 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 MOB3AQ96BX8 217 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 SNX22Q96L94 193 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 ZNF286AQ9HBT8 521 aa12.21□□□□□ -0.45
PRAME-214ENST00000543184 TNFSF15O95150 251 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 ZNF32P17041 273 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 FUT3P21217 361 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 CCNOP22674 350 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 ECI1P42126 302 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 LSM6P62312 80 aaKnown RBP12.21□□□□□ -0.46
PRAME-214ENST00000543184 DAZAP2Q15038 168 aaPredicted RBP12.21□□□□□ -0.46
PRAME-214ENST00000543184 PLCXD3Q63HM9 321 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 RHBDD2Q6NTF9 364 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 SLC25A26Q70HW3 274 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 ZIC4Q8N9L1 334 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 NECAP1Q8NC96 275 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 SPACA9Q96E40 222 aaPredicted RBP12.21□□□□□ -0.46
PRAME-214ENST00000543184 SYT3Q9BQG1 590 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 SRXN1Q9BYN0 137 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 TREM2Q9NZC2 230 aa12.21□□□□□ -0.46
PRAME-214ENST00000543184 FOXD3Q9UJU5 478 aaPredicted RBP12.21□□□□□ -0.46
PRAME-214ENST00000543184 A0A0G2JRQ6 117 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 TRDCB7Z8K6 153 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 WRBO00258 174 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 HMGB3O15347 200 aaKnown RBP12.2□□□□□ -0.46
PRAME-214ENST00000543184 CD55P08174 381 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 FOXC1Q12948 553 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 SRSF6Q13247 344 aaKnown RBP12.2□□□□□ -0.46
PRAME-214ENST00000543184 SLC25A53Q5H9E4 307 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 CMTM1Q8IZ96 169 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 SPTSSAQ969W0 71 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 ZNF665Q9H7R5 613 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 CCL28Q9NRJ3 127 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 CHCHD2Q9Y6H1 151 aaPredicted RBP12.2□□□□□ -0.46
PRAME-214ENST00000543184 TRAV39A0A0B4J263 110 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 A0A0J9YW62 118 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 C9orf172C9J069 976 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 F10P00742 488 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 CTSSP25774 331 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 WDR25Q64LD2 544 aaPredicted RBP12.2□□□□□ -0.46
PRAME-214ENST00000543184 SSX7Q7RTT5 188 aa12.2□□□□□ -0.46
PRAME-214ENST00000543184 TIPARPQ7Z3E1 657 aaKnown RBP12.2□□□□□ -0.46
PRAME-214ENST00000543184 C1QL4Q86Z23 238 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms