RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 C20orf144Q9BQM9 153 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 OR51E2Q9H255 320 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 DUSP21Q9H596 190 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 MEPEQ9NQ76 525 aaPredicted RBP2.51□□□□□ -2.01
USP28-210ENST00000542033 PXMP2Q9NR77 195 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 SLC17A5Q9NRA2 495 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.51□□□□□ -2.01
USP28-210ENST00000542033 TMEM38BQ9NVV0 291 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 EHFQ9NZC4 300 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 IL36GQ9NZH8 169 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 MRPL27Q9P0M9 148 aaKnown RBP2.51□□□□□ -2.01
USP28-210ENST00000542033 PRODH2Q9UF12 536 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 JPT1Q9UK76 154 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 IKZF2Q9UKS7 526 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 FARSAQ9Y285 508 aaKnown RBP2.51□□□□□ -2.01
USP28-210ENST00000542033 NTNG1Q9Y2I2 539 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 TIMM10BQ9Y5J6 103 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 TSSC4Q9Y5U2 329 aaPredicted RBP2.51□□□□□ -2.01
USP28-210ENST00000542033 FLVCR1Q9Y5Y0 555 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 CDH10Q9Y6N8 788 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 MED1Q15648 1581 aaPredicted RBP2.51□□□□□ -2.01
USP28-210ENST00000542033 TULP4Q9NRJ4 1543 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 ADAMTS13Q76LX8 1427 aa2.51□□□□□ -2.01
USP28-210ENST00000542033 COL1A2P08123 1366 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 RIMBP3CA6NJZ7 1639 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 RIMBP3BA6NNM3 1639 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 IGSF9BQ9UPX0 1349 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 PPIAL4EA0A075B759 164 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 IFITM5A6NNB3 132 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 ZNF726A6NNF4 738 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 DHRS7CA6NNS2 312 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 F5H6K3 240 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 GPR31O00270 319 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 TNFRSF11BO00300 401 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 MANBAO00462 879 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 RFXANKO14593 260 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 AZIN1O14977 448 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 SIVA1O15304 175 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 B4GALT5O43286 388 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 LYRM1O43325 122 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 XRCC2O43543 280 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 PRKAB2O43741 272 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 AIREO43918 545 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 MFSD11O43934 449 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 SOX15O60248 233 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 SLC19A2O60779 497 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 OR2F2O95006 317 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 S1PR2O95136 353 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 CA1P00915 261 aaPredicted RBP2.5□□□□□ -2.01
USP28-210ENST00000542033 PMP2P02689 132 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 MT-ND4P03905 459 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 CD74P04233 296 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 FABP3P05413 133 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 BCHEP06276 602 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 GIPP09681 153 aaPredicted RBP2.5□□□□□ -2.01
USP28-210ENST00000542033 SULT1A3P0DMM9 295 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 SULT1A4P0DMN0 295 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 PPIAL4FP0DN26 164 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 CELP19835 753 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 NFYAP23511 347 aaPredicted RBP2.5□□□□□ -2.01
USP28-210ENST00000542033 OMGP23515 440 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 IMPA1P29218 277 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 ELK3P41970 407 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 NUDT2P50583 147 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 ACLYP53396 1101 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 TAS2R41P59536 307 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 KRTAP10-3P60369 221 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 RPL32P62910 135 aaKnown RBP2.5□□□□□ -2.01
USP28-210ENST00000542033 HMGCS1Q01581 520 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 C2orf80Q0P641 193 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 ZNF154Q13106 437 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 HTR4Q13639 388 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 EBPQ15125 230 aaKnown RBP2.5□□□□□ -2.01
USP28-210ENST00000542033 PRSS8Q16651 343 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 PDZD11Q5EBL8 140 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 FAM78BQ5VT40 261 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 PVRIGQ6DKI7 326 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 ENPP6Q6UWR7 440 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 PAMR1Q6UXH9 720 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 TOMM20LQ6UXN7 152 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 OLIG3Q7RTU3 272 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 SLC35F2Q8IXU6 374 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 C20orf196Q8IYI0 205 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 CMTM8Q8IZV2 173 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 BLIDQ8IZY5 108 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 OR6V1Q8N148 313 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 LINC01561Q8N1V8 128 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 HIST3H2BBQ8N257 126 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 FTMTQ8N4E7 242 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 CBR4Q8N4T8 237 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 SPICQ8N5J4 248 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 JAGN1Q8N5M9 183 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 C2orf73Q8N5S3 287 aaPredicted RBP2.5□□□□□ -2.01
USP28-210ENST00000542033 CSNK1A1LQ8N752 337 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 ACOT4Q8N9L9 421 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 CHST4Q8NCG5 386 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 OR7G2Q8NG99 324 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 OR4F6Q8NGB9 312 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 OR4K5Q8NGD3 323 aa2.5□□□□□ -2.01
USP28-210ENST00000542033 OR10AD1Q8NGE0 317 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms