RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CFPP27918 469 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 GABRA5P31644 462 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 PLA2G7Q13093 441 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 UNC119Q13432 240 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 GPR176Q14439 515 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 ATAD3CQ5T2N8 411 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 SLC35E4Q6ICL7 350 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 CD200R1LQ6Q8B3 271 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 CCBE1Q6UXH8 406 aaPredicted RBP7.87□□□□□ -1.15
YBX3-212ENST00000542002 HEPN1Q6WQI6 88 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 C12orf54Q6X4T0 127 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 ABHD12Q8N2K0 398 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 NKAIN3Q8N8D7 197 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 OR4P4Q8NGL7 312 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 CCDC107Q8WV48 283 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 THRSPQ92748 146 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 MRPS24Q96EL2 167 aaKnown RBP7.87□□□□□ -1.15
YBX3-212ENST00000542002 Q96M66 194 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 SSX3Q99909 188 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 BARHL1Q9BZE3 327 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 Q9H521 79 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 ZNF286AQ9HBT8 521 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 NDUFB11Q9NX14 153 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 RCC2Q9P258 522 aaKnown RBP7.87□□□□□ -1.15
YBX3-212ENST00000542002 TRRAPQ9Y4A5 3859 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 A0A0A6YYD4 124 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 NPIPB11E5RHQ5 1161 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 LY6LH3BQJ8 138 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 C15orf65H3BRN8 121 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 H3BUX3 64 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 PAHP00439 452 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 IGLV1-47P01700 117 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 IGHV3-7P01780 117 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 HTR2CP28335 458 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 SSTR5P35346 364 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 OR10A3P58181 314 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 DYNC1I2Q13409 638 aaKnown RBP7.86□□□□□ -1.15
YBX3-212ENST00000542002 P2RY14Q15391 338 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 TRAM1Q15629 374 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 SSX2Q16385 188 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 LY6EQ16553 131 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 MPV17LQ2QL34 196 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 PLA1AQ53H76 456 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 FBLN7Q53RD9 439 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 GLT8D1Q68CQ7 371 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 RAB12Q6IQ22 244 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 ZNF773Q6PK81 442 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 ZNF497Q6ZNH5 498 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 LINC00596Q86U02 117 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 NR2C2APQ86WQ0 139 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 ZNF565Q8N9K5 539 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 UBALD1Q8TB05 177 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 MRGPRDQ8TDS7 321 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 LEAP2Q969E1 77 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 MALSU1Q96EH3 234 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 KIRREL1Q96J84 757 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 NICN1Q9BSH3 213 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 CLEC7AQ9BXN2 247 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 DPAGT1Q9H3H5 408 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 PCDHB16Q9NRJ7 776 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 CALYQ9NYX4 217 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 OR6C3Q9NZP0 311 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 HILPDAQ9Y5L2 63 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 PEX16Q9Y5Y5 336 aa7.86□□□□□ -1.15
YBX3-212ENST00000542002 A0A087X0M5 115 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 A0A1B0GX30 115 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 TRDV1A0A1B0GX56 115 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 UBE2QL1A1L167 161 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 ZNF729A6NN14 1252 aaPredicted RBP7.85□□□□□ -1.15
YBX3-212ENST00000542002 VGLL3A8MV65 326 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 TMEM14DPA8MWL7 114 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 CHST1O43916 411 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 MPIG6BO95866 241 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 FUT3P21217 361 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 PSMA1P25786 263 aaKnown RBP7.85□□□□□ -1.15
YBX3-212ENST00000542002 CD34P28906 385 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 GLP1RP43220 463 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 KCNJ3P48549 501 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 LGALS4P56470 323 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 CLDN12P56749 244 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 KRTAP10-3P60369 221 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 SRSF4Q08170 494 aaKnown RBP7.85□□□□□ -1.15
YBX3-212ENST00000542002 FOXL1Q12952 345 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 LTC4SQ16873 150 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 LRRC75BQ2VPJ9 315 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 Q6ZPA2 131 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 GAPTQ8N292 157 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 SULT4A1Q9BR01 284 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 GAL3ST2Q9H3Q3 398 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 GHRLQ9UBU3 117 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 VPREB3Q9UKI3 123 aa7.85□□□□□ -1.15
YBX3-212ENST00000542002 TBL2Q9Y4P3 447 aaKnown RBP7.85□□□□□ -1.15
YBX3-212ENST00000542002 TRAV1-2A0A0B4J238 106 aa7.84□□□□□ -1.15
YBX3-212ENST00000542002 A0A1W2PPE3 182 aa7.84□□□□□ -1.15
YBX3-212ENST00000542002 TMEM30CPA0ZSE6 113 aa7.84□□□□□ -1.15
YBX3-212ENST00000542002 FAM90A10PA6NDY2 464 aa7.84□□□□□ -1.15
YBX3-212ENST00000542002 FAM90A18PA6NE21 464 aa7.84□□□□□ -1.15
YBX3-212ENST00000542002 FAM90A16PA6NEW6 464 aa7.84□□□□□ -1.15
YBX3-212ENST00000542002 FAM90A20PA6NIJ5 464 aa7.84□□□□□ -1.15
YBX3-212ENST00000542002 FAM90A7PA6NKC0 464 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms