RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CHST1O43916 411 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 GALP22466 123 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 BHLHA15Q7RTS1 189 aaPredicted RBP13.6□□□□□ -0.23
HMGA2-210ENST00000541363 PMCHL2Q9BQD1 86 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 MRPL30Q8TCC3 161 aaKnown RBP13.6□□□□□ -0.23
HMGA2-210ENST00000541363 N4BP2Q86UW6 1770 aaPredicted RBP13.6□□□□□ -0.23
HMGA2-210ENST00000541363 HOXA6P31267 233 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 KIRREL2Q6UWL6 708 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 CAMTA1Q9Y6Y1 1673 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 PAGE4O60829 102 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 TMIGD3P0DMS9 266 aaPredicted RBP13.6□□□□□ -0.23
HMGA2-210ENST00000541363 ZNF774Q6NX45 483 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 CCL7P80098 99 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 WIPI1Q5MNZ9 446 aaPredicted RBP13.6□□□□□ -0.23
HMGA2-210ENST00000541363 HEXA-AS1Q9H8Q6 139 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 GPR35Q9HC97 309 aa13.6□□□□□ -0.23
HMGA2-210ENST00000541363 IGKV3D-11A0A0A0MRZ8 115 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 IGKV3-11P04433 115 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 PMELP40967 661 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 WDR38Q5JTN6 314 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 GPR27Q9NS67 375 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 MEX3AA1L020 520 aaKnown RBP13.59□□□□□ -0.23
HMGA2-210ENST00000541363 A8MWL6 223 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 A0A1W2PS18 150 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 FOXO1Q12778 655 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 NUDT16L1Q9BRJ7 211 aaKnown RBP13.59□□□□□ -0.23
HMGA2-210ENST00000541363 PDLIM7Q9NR12 457 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 H0Y8X5 98 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 FGF22Q9HCT0 170 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 APELAP0DMC3 54 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 UBE2V2Q15819 145 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 NFAM1Q8NET5 270 aaPredicted RBP13.59□□□□□ -0.23
HMGA2-210ENST00000541363 HARBI1Q96MB7 349 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 CITED2Q99967 270 aaPredicted RBP13.59□□□□□ -0.23
HMGA2-210ENST00000541363 IL19Q9UHD0 177 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 H3BQ15 152 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 RGPD1P0DJD0 1748 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 ASXL3Q9C0F0 2248 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 IGHV3OR16-12A0A075B7B8 117 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 SLC25A17O43808 307 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 SLC35B1P78383 322 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 PLPPR5Q32ZL2 321 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 SLC52A3Q9NQ40 469 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 KCNE3Q9Y6H6 103 aa13.59□□□□□ -0.23
HMGA2-210ENST00000541363 MFAP4P55083 255 aa13.58□□□□□ -0.23
HMGA2-210ENST00000541363 ZNF506Q5JVG8 444 aa13.58□□□□□ -0.23
HMGA2-210ENST00000541363 OR1L8Q8NGR8 309 aa13.58□□□□□ -0.23
HMGA2-210ENST00000541363 KCNAB3O43448 404 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 VDAC1P21796 283 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 GFRA1P56159 465 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 GUCA2BQ16661 112 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 NT5CQ8TCD5 201 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 ALG14Q96F25 216 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 PABPC1L2AQ5JQF8 200 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 C17orf99Q6UX52 265 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 TSPAN32Q96QS1 320 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 SEZ6L2Q6UXD5 910 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 MRGPRX3Q96LB0 322 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 SCN2AQ99250 2005 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 PLPP2O43688 288 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 CCDC144NLQ6NUI1 221 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 CLEC18BQ6UXF7 455 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 FCMRO60667 390 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 ABHD14BQ96IU4 210 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 UQCR10Q9UDW1 63 aa13.58□□□□□ -0.24
HMGA2-210ENST00000541363 CTSDP07339 412 aaPredicted RBP13.57□□□□□ -0.24
HMGA2-210ENST00000541363 SMIM13P0DJ93 91 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 SLC23A3Q6PIS1 610 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 PATE1Q8WXA2 126 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 TMEM101Q96IK0 257 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 TBX21Q9UL17 535 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 ZNF32P17041 273 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 MFAP2P55001 183 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 LEMD1Q68G75 181 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 STPG2Q8N412 459 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 GALNT14Q96FL9 552 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 ZBP1Q9H171 429 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 MPC1Q9Y5U8 109 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 A0A1B0GU03 582 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 NPFFO15130 113 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 PWWP2BQ6NUJ5 590 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 RNF133Q8WVZ7 376 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 VCX2Q9H322 139 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 ANKRD31Q8N7Z5 1873 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 VEGFBP49765 207 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 RELQ04864 619 aaPredicted RBP13.57□□□□□ -0.24
HMGA2-210ENST00000541363 HSPB9Q9BQS6 159 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 WNT5BQ9H1J7 359 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 OR51B2Q9Y5P1 312 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 TMEM262E9PQX1 116 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 PRDX2P32119 198 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 ERVFRD-1P60508 538 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 NSUN5P2Q63ZY6 315 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 STPG3Q8N7X2 389 aa13.57□□□□□ -0.24
HMGA2-210ENST00000541363 PSMG3Q9BT73 122 aaPredicted RBP13.57□□□□□ -0.24
HMGA2-210ENST00000541363 KNL1Q8NG31 2342 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 PRKNO60260 465 aaPredicted RBP13.56□□□□□ -0.24
HMGA2-210ENST00000541363 PCMT1P22061 227 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 TNFSF10P50591 281 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms