RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ZNF880Q6PDB4 577 aa8.15□□□□□ -1.1
CNOT4-212ENST00000541284 DPPA2Q7Z7J5 298 aa8.15□□□□□ -1.1
CNOT4-212ENST00000541284 C1QL4Q86Z23 238 aa8.15□□□□□ -1.1
CNOT4-212ENST00000541284 SAXO1Q8IYX7 474 aa8.15□□□□□ -1.1
CNOT4-212ENST00000541284 FAM185AQ8N0U4 392 aa8.15□□□□□ -1.1
CNOT4-212ENST00000541284 FAM24BQ8N5W8 94 aa8.15□□□□□ -1.1
CNOT4-212ENST00000541284 EIF5A2Q9GZV4 153 aaKnown RBP8.15□□□□□ -1.1
CNOT4-212ENST00000541284 MAGT1Q9H0U3 335 aa8.15□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF442Q9H7R0 627 aa8.15□□□□□ -1.1
CNOT4-212ENST00000541284 SLC7A11Q9UPY5 501 aa8.15□□□□□ -1.1
CNOT4-212ENST00000541284 BDP1A6H8Y1 2624 aa8.15□□□□□ -1.11
CNOT4-212ENST00000541284 LINC00587B1AMM8 73 aa8.15□□□□□ -1.11
CNOT4-212ENST00000541284 LILRA1O75019 489 aa8.15□□□□□ -1.11
CNOT4-212ENST00000541284 IGHV3-9P01782 118 aa8.15□□□□□ -1.11
CNOT4-212ENST00000541284 OR13C7P0DN81 318 aa8.15□□□□□ -1.11
CNOT4-212ENST00000541284 GLP1RP43220 463 aa8.15□□□□□ -1.11
CNOT4-212ENST00000541284 HERV-K104P61576 105 aa8.15□□□□□ -1.11
CNOT4-212ENST00000541284 PRDX4Q13162 271 aa8.15□□□□□ -1.11
CNOT4-212ENST00000541284 TIPARPQ7Z3E1 657 aaKnown RBP8.15□□□□□ -1.11
CNOT4-212ENST00000541284 NANPQ8TBE9 248 aa8.15□□□□□ -1.11
CNOT4-212ENST00000541284 MRPL30Q8TCC3 161 aaKnown RBP8.15□□□□□ -1.11
CNOT4-212ENST00000541284 CNTRLQ7Z7A1 2325 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 A0A1B0GV50 99 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 C9J4A7 227 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 PRSS44E7EML9 344 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 SSSCA1O60232 199 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 FOLR3P41439 243 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 NKX2-1P43699 371 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-212ENST00000541284 PCBD1P61457 104 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 LINC00470Q9BZP3 86 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 PLEKHF2Q9H8W4 249 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 CCL28Q9NRJ3 127 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 PARPBPQ9NWS1 579 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 B4E171 279 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 IGKV1-39P01597 117 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 IGKV1D-39P04432 117 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 CELA3AP09093 270 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 CCL2P13500 99 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 TSPAN7P41732 249 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 LHX2P50458 406 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 DYNLT3P51808 116 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 RUNX1Q01196 453 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 FABP9Q0Z7S8 132 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 ZNF324BQ6AW86 544 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-212ENST00000541284 OR1J1Q8NGS3 322 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 EDARADDQ8WWZ3 215 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 FBXO9Q9UK97 447 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-212ENST00000541284 RBFOX3A6NFN3 312 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 SYNGR1O43759 233 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 CLN5O75503 358 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 P04436 131 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 SRPXP78539 464 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 ARF1P84077 181 aaKnown RBP8.14□□□□□ -1.11
CNOT4-212ENST00000541284 CEACAM21Q3KPI0 293 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 ACER2Q5QJU3 275 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 C1orf210Q8IVY1 113 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 ZFP62Q8NB50 900 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-212ENST00000541284 LFNGQ8NES3 379 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 OR5C1Q8NGR4 320 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 OR2G3Q8NGZ4 309 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 SMDT1Q9H4I9 107 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 ZNF552Q9H707 407 aaPredicted RBP8.14□□□□□ -1.11
CNOT4-212ENST00000541284 CALHM2Q9HA72 323 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 GSN-AS1Q9NRJ2 163 aa8.14□□□□□ -1.11
CNOT4-212ENST00000541284 ZNF407Q9C0G0 2248 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 TRBV6-6A0A0A6YYG2 114 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 DUXBA0A1W2PPF3 345 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 ATXN7O15265 892 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-212ENST00000541284 FBP1P09467 338 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 WNT2P09544 360 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 GPM6AP51674 278 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 CLDN18P56856 261 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 Q6ZRM9 215 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 OR5D13Q8NGL4 314 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 CPNE4Q96A23 557 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-212ENST00000541284 ATP23Q9Y6H3 246 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 ESPL1Q14674 2120 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 H0Y980 276 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 M0R036 132 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 PGLYRP1O75594 196 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-212ENST00000541284 NGFP01138 241 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 OMGP23515 440 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 HAAOP46952 286 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 KRBOX4Q5JUW0 171 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 KIAA1456Q9P272 454 aa8.13□□□□□ -1.11
CNOT4-212ENST00000541284 TRAV24A0A0B4J272 114 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 H0YL77 283 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 NEURL1O76050 574 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 CST7O76096 145 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 PRH1P02810 166 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 S100A8P05109 93 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 MMP9P14780 707 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 ZNF154Q13106 437 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 GNMTQ14749 295 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 IGFBP7Q16270 282 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 ZNF506Q5JVG8 444 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 CLDND2Q8NHS1 167 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 IL22RA2Q969J5 263 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 KCNJ16Q9NPI9 418 aa8.12□□□□□ -1.11
CNOT4-212ENST00000541284 ZNF727A8MUV8 499 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms