RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 ZNF565Q8N9K5 539 aa11.5□□□□□ -0.57
MSRB3-209ENST00000540804 MRAPQ8TCY5 172 aa11.5□□□□□ -0.57
MSRB3-209ENST00000540804 GPR148Q8TDV2 347 aa11.5□□□□□ -0.57
MSRB3-209ENST00000540804 TMEM106AQ96A25 262 aa11.5□□□□□ -0.57
MSRB3-209ENST00000540804 RPEQ96AT9 228 aa11.5□□□□□ -0.57
MSRB3-209ENST00000540804 AKR1E2Q96JD6 320 aa11.5□□□□□ -0.57
MSRB3-209ENST00000540804 DPCDQ9BVM2 203 aaPredicted RBP11.5□□□□□ -0.57
MSRB3-209ENST00000540804 LINC00527Q9UJ94 153 aa11.5□□□□□ -0.57
MSRB3-209ENST00000540804 ST3GAL6Q9Y274 331 aa11.5□□□□□ -0.57
MSRB3-209ENST00000540804 FAM90A18PA6NE21 464 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 FAM90A16PA6NEW6 464 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 FAM90A20PA6NIJ5 464 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 FAM90A9PA6NNJ1 464 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 FAM90A12PA8MX19 464 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 FAM90A5PA8MXJ8 464 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 NPIPB11E5RHQ5 1161 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 H3BUI4 141 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 GEMIN2O14893 280 aaKnown RBP11.49□□□□□ -0.57
MSRB3-209ENST00000540804 PIN1P1O15428 100 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 FAM90A15PP0C7V4 464 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 FAM90A13PP0C7W8 464 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 FAM90A14PP0C7W9 464 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 FAM90A24PP0C7X0 464 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 PF4V1P10720 104 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 CD33P20138 364 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 SERPINA2P20848 420 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 C21orf33P30042 268 aaPredicted RBP11.49□□□□□ -0.57
MSRB3-209ENST00000540804 MNDAP41218 407 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 REG1BP48304 166 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 DOC2BQ14184 412 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 KHDC1LQ5JSQ8 128 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 ZNF329Q86UD4 541 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 ZNF555Q8NEP9 628 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 Q8NFD4 153 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 CCDC107Q8WV48 283 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 NOL4LQ96MY1 436 aaPredicted RBP11.49□□□□□ -0.57
MSRB3-209ENST00000540804 MYCBPQ99417 103 aaPredicted RBP11.49□□□□□ -0.57
MSRB3-209ENST00000540804 BARHL1Q9BZE3 327 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 NECAP2Q9NVZ3 263 aa11.49□□□□□ -0.57
MSRB3-209ENST00000540804 SMPD3Q9NY59 655 aaPredicted RBP11.49□□□□□ -0.57
MSRB3-209ENST00000540804 PLXNB1O43157 2135 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 TRAV8-7A0A075B6U6 113 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 IGHV3-43A0A0B4J1X8 118 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 IGHV3-72A0A0B4J1Y9 119 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 A0A1W2PPK0 400 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 OGG1O15527 345 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 OR7C1O76099 320 aaPredicted RBP11.48□□□□□ -0.57
MSRB3-209ENST00000540804 IGHV3-43DP0DP04 118 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 ZNF93P35789 620 aaPredicted RBP11.48□□□□□ -0.57
MSRB3-209ENST00000540804 ARHGDIBP52566 201 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 RBM11P57052 281 aaKnown RBP11.48□□□□□ -0.57
MSRB3-209ENST00000540804 HES1Q14469 280 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 C18orf65Q6ZTR6 163 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 OSR2Q8N2R0 312 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 WFDC9Q8NEX5 89 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 OR52N1Q8NH53 320 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 GHSRQ92847 366 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 CREB3L1Q96BA8 519 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 METTL9Q9H1A3 318 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 LINC00574Q9H8X3 128 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 BABAM2Q9NXR7 383 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 MOB4Q9Y3A3 225 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 TSSC4Q9Y5U2 329 aaPredicted RBP11.48□□□□□ -0.57
MSRB3-209ENST00000540804 HSPE1-MOB4S4R3N1 261 aa11.48□□□□□ -0.57
MSRB3-209ENST00000540804 PNMA8CA0A1B0GUJ8 204 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 LINC01548A6NM66 108 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 OOSP1A8MZH6 123 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 IGKV1D-33P01593 117 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 IGKV1-33P01594 117 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 PF4P02776 101 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 CD2P06729 351 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 TMEM11P17152 192 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 IGFBP3P17936 291 aaPredicted RBP11.47□□□□□ -0.57
MSRB3-209ENST00000540804 DCKP27707 260 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 BDKRB2P30411 391 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 RPS11P62280 158 aaKnown RBP eCLIP11.47□□□□□ -0.57
MSRB3-209ENST00000540804 CCDC58Q4VC31 144 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 ATAD3CQ5T2N8 411 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 CCDC144NLQ6NUI1 221 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 TMPRSS11AQ6ZMR5 421 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 C10orf67Q8IYJ2 551 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 C5orf56Q8N8D9 126 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 OR4X2Q8NGF9 303 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 CYGBQ8WWM9 190 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 SMIM19Q96E16 107 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 ZNF184Q99676 751 aaPredicted RBP11.47□□□□□ -0.57
MSRB3-209ENST00000540804 NCOR1P1Q9H4R4 102 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 TMEM138Q9NPI0 162 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 DIMT1Q9UNQ2 313 aaKnown RBP11.47□□□□□ -0.57
MSRB3-209ENST00000540804 ZNF281Q9Y2X9 895 aa11.47□□□□□ -0.57
MSRB3-209ENST00000540804 TRBV5-5A0A0J9YX44 114 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 PSMB11A5LHX3 300 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 C15orf65H3BRN8 121 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 MPIG6BO95866 241 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 CSTBP04080 98 aaKnown RBP11.46□□□□□ -0.57
MSRB3-209ENST00000540804 LOXL3P58215 753 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 KRTAP10-11P60412 298 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 PPP3R1P63098 170 aa11.46□□□□□ -0.57
MSRB3-209ENST00000540804 MADCAM1Q13477 382 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms