RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 FAHD2BQ6P2I3 314 aaPredicted RBP12.27□□□□□ -0.45
USP3-204ENST00000540797 FAHD2AQ96GK7 314 aa12.27□□□□□ -0.45
USP3-204ENST00000540797 WFDC6Q9BQY6 131 aa12.27□□□□□ -0.45
USP3-204ENST00000540797 TMUB1Q9BVT8 246 aa12.27□□□□□ -0.45
USP3-204ENST00000540797 ENDOGQ14249 297 aaKnown RBP12.27□□□□□ -0.45
USP3-204ENST00000540797 IRF3Q14653 427 aa12.27□□□□□ -0.45
USP3-204ENST00000540797 ST3GAL2Q16842 350 aa12.27□□□□□ -0.45
USP3-204ENST00000540797 CCDC144NLQ6NUI1 221 aa12.27□□□□□ -0.45
USP3-204ENST00000540797 DYRK2Q92630 601 aa12.27□□□□□ -0.45
USP3-204ENST00000540797 ZDHHC8Q9ULC8 765 aa12.27□□□□□ -0.45
USP3-204ENST00000540797 RBM11P57052 281 aaKnown RBP12.27□□□□□ -0.45
USP3-204ENST00000540797 EXOSC2Q13868 293 aaKnown RBP12.27□□□□□ -0.45
USP3-204ENST00000540797 OR4A4PQ8NGN8 299 aa12.27□□□□□ -0.45
USP3-204ENST00000540797 OR5C1Q8NGR4 320 aa12.27□□□□□ -0.45
USP3-204ENST00000540797 FAM24AA6NFZ4 105 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 GZMKP49863 264 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 ZNF236Q9UL36 1845 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 RECKO95980 971 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 S100A4P26447 101 aaKnown RBP12.26□□□□□ -0.45
USP3-204ENST00000540797 ERVFRD-1P60508 538 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 LIAT1Q6ZQX7 453 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 CHRDL1Q9BU40 450 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 OR2W1Q9Y3N9 320 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 IGLV1-36A0A0B4J1U3 117 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 CTDSPLO15194 276 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 RFPL3SP0C7P2 107 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 RAG2P55895 527 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 HARBI1Q96MB7 349 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 PCDHGA9Q9Y5G4 932 aaKnown RBP12.26□□□□□ -0.45
USP3-204ENST00000540797 A0A0G2JMZ2 1700 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 LRRC37A2A6NM11 1700 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 PPP5D1E7EU14 171 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 GSTZ1O43708 216 aaPredicted RBP12.26□□□□□ -0.45
USP3-204ENST00000540797 CRHP06850 196 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 CSRP3P50461 194 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 SHISA5Q8N114 240 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 RFLNBQ8N5W9 214 aa12.26□□□□□ -0.45
USP3-204ENST00000540797 H0Y8G0 127 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 EFEMP2O95967 443 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 ZNF703Q9H7S9 590 aaPredicted RBP12.25□□□□□ -0.45
USP3-204ENST00000540797 SF3B6Q9Y3B4 125 aaKnown RBP12.25□□□□□ -0.45
USP3-204ENST00000540797 CHCHD2Q9Y6H1 151 aaPredicted RBP12.25□□□□□ -0.45
USP3-204ENST00000540797 V9GYS6 101 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 ZNF320A2RRD8 509 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 MGST3O14880 152 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 SEMA7AO75326 666 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 CLDN14O95500 239 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 SCGB1D1O95968 90 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 NDUFA6P56556 154 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 LYZP61626 148 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 IL13RA2Q14627 380 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 TMEM91Q6ZNR0 172 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 OR2C3Q8N628 320 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 ZNF714Q96N38 554 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 ABCA7Q8IZY2 2146 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 IGKV3D-11A0A0A0MRZ8 115 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 B3GALNT1O75752 331 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 CST4P01036 141 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 PHYHD1Q5SRE7 291 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 ZNF788Q6ZQV5 615 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 NECAP1Q8NC96 275 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 SOX15O60248 233 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 BATFQ16520 125 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 TEX30Q5JUR7 227 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 OR8G5Q8NG78 346 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 ELOVL5Q9NYP7 299 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 DOK5Q9P104 306 aa12.25□□□□□ -0.45
USP3-204ENST00000540797 A0A1W2PPE3 182 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 ARG1P05089 322 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 MMDQ15546 238 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 ZNF260Q3ZCT1 412 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 BCL2L2Q92843 193 aaPredicted RBP12.24□□□□□ -0.45
USP3-204ENST00000540797 IGKV1D-42A0A075B6H8 117 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 IGF2P01344 180 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 TPRX1Q8N7U7 411 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 ZNF596Q8TC21 504 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 FAM186AA6NE01 2351 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 PSME4Q14997 1843 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 C17orf51A8MQB3 221 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 IFNL4K9M1U5 179 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 CELA3AP09093 270 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 PPP1CCP36873 323 aaKnown RBP12.24□□□□□ -0.45
USP3-204ENST00000540797 REG1BP48304 166 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 ATP5J2P56134 94 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 TCTE3Q8IZS6 198 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 AMELYQ99218 206 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 OR51I2Q9H344 312 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 SLC45A2Q9UMX9 530 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 RAXQ9Y2V3 346 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 GNG7O60262 68 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 OR2C1O95371 312 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 ORM2P19652 201 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 CD200P41217 278 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 FAM3AP98173 230 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 ZBTB34Q8NCN2 500 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 CXorf58Q96LI9 332 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 TCEAL7Q9BRU2 100 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 FOXD3Q9UJU5 478 aaPredicted RBP12.24□□□□□ -0.45
USP3-204ENST00000540797 DBX1A6NMT0 343 aa12.24□□□□□ -0.45
USP3-204ENST00000540797 ZNF826PQ6ZT77 177 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms