RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 VSTM5A8MXK1 200 aa20.57■□□□□ 0.88
TTC3-225ENST00000540756 FPR2P25090 351 aa20.57■□□□□ 0.88
TTC3-225ENST00000540756 OR3A1P47881 315 aa20.57■□□□□ 0.88
TTC3-225ENST00000540756 TPRX1Q8N7U7 411 aa20.57■□□□□ 0.88
TTC3-225ENST00000540756 WDR89Q96FK6 387 aaPredicted RBP20.57■□□□□ 0.88
TTC3-225ENST00000540756 SHARPINQ9H0F6 387 aa20.57■□□□□ 0.88
TTC3-225ENST00000540756 RIMS4Q9H426 269 aaPredicted RBP20.57■□□□□ 0.88
TTC3-225ENST00000540756 MYOZ1Q9NP98 299 aaPredicted RBP20.57■□□□□ 0.88
TTC3-225ENST00000540756 RNF7Q9UBF6 113 aa20.57■□□□□ 0.88
TTC3-225ENST00000540756 RAI1Q7Z5J4 1906 aaPredicted RBP20.57■□□□□ 0.88
TTC3-225ENST00000540756 MEX3AA1L020 520 aaKnown RBP20.56■□□□□ 0.88
TTC3-225ENST00000540756 C19orf84I3L1E1 186 aa20.56■□□□□ 0.88
TTC3-225ENST00000540756 HLA-AP01891 365 aaKnown RBP20.56■□□□□ 0.88
TTC3-225ENST00000540756 ADH4P08319 380 aa20.56■□□□□ 0.88
TTC3-225ENST00000540756 ZBTB25P24278 435 aa20.56■□□□□ 0.88
TTC3-225ENST00000540756 FXYD4P59646 89 aa20.56■□□□□ 0.88
TTC3-225ENST00000540756 SRSF7Q16629 238 aaKnown RBP eCLIP20.56■□□□□ 0.88
TTC3-225ENST00000540756 SHEQ5VZ18 495 aa20.56■□□□□ 0.88
TTC3-225ENST00000540756 ASCC1Q8N9N2 400 aaKnown RBP20.56■□□□□ 0.88
TTC3-225ENST00000540756 COQ2Q96H96 371 aa20.56■□□□□ 0.88
TTC3-225ENST00000540756 SPTAN1Q13813 2472 aaKnown RBP20.56■□□□□ 0.88
TTC3-225ENST00000540756 CD55P08174 381 aa20.56■□□□□ 0.88
TTC3-225ENST00000540756 MDH2P40926 338 aaKnown RBP20.56■□□□□ 0.88
TTC3-225ENST00000540756 GABRA2P47869 451 aa20.56■□□□□ 0.88
TTC3-225ENST00000540756 ZNF672Q499Z4 452 aaPredicted RBP20.56■□□□□ 0.88
TTC3-225ENST00000540756 GAPTQ8N292 157 aa20.56■□□□□ 0.88
TTC3-225ENST00000540756 TOMM40LQ969M1 308 aa20.56■□□□□ 0.88
TTC3-225ENST00000540756 PGAM2P15259 253 aa20.55■□□□□ 0.88
TTC3-225ENST00000540756 PRR18Q8N4B5 295 aa20.55■□□□□ 0.88
TTC3-225ENST00000540756 DEFB108BQ8NET1 73 aa20.55■□□□□ 0.88
TTC3-225ENST00000540756 TMEM204Q9BSN7 226 aa20.55■□□□□ 0.88
TTC3-225ENST00000540756 FXYD6Q9H0Q3 95 aa20.55■□□□□ 0.88
TTC3-225ENST00000540756 DYNLRB1Q9NP97 96 aa20.55■□□□□ 0.88
TTC3-225ENST00000540756 MGAT4CQ9UBM8 478 aa20.55■□□□□ 0.88
TTC3-225ENST00000540756 TRAPPC2LQ9UL33 140 aa20.55■□□□□ 0.88
TTC3-225ENST00000540756 NPTNQ9Y639 398 aa20.55■□□□□ 0.88
TTC3-225ENST00000540756 ZNF462Q96JM2 2506 aa20.55■□□□□ 0.88
TTC3-225ENST00000540756 A0A1B0GW55 424 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 DUX4L2P0CJ85 424 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 DUX4L3P0CJ86 424 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 DUX4L4P0CJ87 422 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 DUX4L5P0CJ88 424 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 DUX4L6P0CJ89 424 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 DUX4L7P0CJ90 424 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 AADACP22760 399 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 VAMP1P23763 118 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 DUX4L9Q6RFH8 374 aaPredicted RBP20.54■□□□□ 0.88
TTC3-225ENST00000540756 TCTE3Q8IZS6 198 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 ZNRF1Q8ND25 227 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 KIRREL1Q96J84 757 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 DUX4Q9UBX2 424 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 C9orf170A2RU37 121 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 IFNL4K9M1U5 179 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 ZNF737O75373 536 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 SIX6O95475 246 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 SELLP14151 372 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 LIN54Q6MZP7 749 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 ZNF808Q8N4W9 903 aaPredicted RBP20.54■□□□□ 0.88
TTC3-225ENST00000540756 Q8TCH9 128 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 CHIAQ9BZP6 476 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 SAP30LQ9HAJ7 183 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 DECR2Q9NUI1 292 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 PRR13Q9NZ81 148 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 KIF25Q9UIL4 384 aa20.54■□□□□ 0.88
TTC3-225ENST00000540756 MEIKINA0A087WXM9 373 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 KIR2DS1A0A191URI9 304 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 KIR2DS4P43632 304 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 KIR2DS1Q14954 304 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 EFNB3Q15768 340 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 ZFP69Q49AA0 526 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 LYG2Q86SG7 212 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 FAM90A1Q86YD7 464 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 MUC15Q8N387 334 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 CASTOR1Q8WTX7 329 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 DIRC2Q96SL1 478 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 DHRS9Q9BPW9 319 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 USP9XQ93008 2570 aaPredicted RBP20.53■□□□□ 0.88
TTC3-225ENST00000540756 GLIPR1P48060 266 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 SUPT4H1P63272 117 aaKnown RBP20.53■□□□□ 0.88
TTC3-225ENST00000540756 IL13RA1P78552 427 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 HLA-DRB3P79483 266 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 SWI5Q1ZZU3 235 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 TMEM185AQ8NFB2 350 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 OR2AK2Q8NG84 335 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 ANGPTL6Q8NI99 470 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 IL1F10Q8WWZ1 152 aa20.53■□□□□ 0.88
TTC3-225ENST00000540756 ZNF436Q9C0F3 470 aaPredicted RBP20.53■□□□□ 0.88
TTC3-225ENST00000540756 B9A039 149 aa20.52■□□□□ 0.88
TTC3-225ENST00000540756 TNFRSF1AP19438 455 aa20.52■□□□□ 0.88
TTC3-225ENST00000540756 MAB21L2Q9Y586 359 aa20.52■□□□□ 0.88
TTC3-225ENST00000540756 MYO18BQ8IUG5 2567 aa20.52■□□□□ 0.87
TTC3-225ENST00000540756 PPYP01298 95 aa20.51■□□□□ 0.87
TTC3-225ENST00000540756 AGAP20933 346 aa20.51■□□□□ 0.87
TTC3-225ENST00000540756 GLP1RP43220 463 aa20.51■□□□□ 0.87
TTC3-225ENST00000540756 H2BFSP57053 126 aa20.51■□□□□ 0.87
TTC3-225ENST00000540756 TESK1Q15569 626 aa20.51■□□□□ 0.87
TTC3-225ENST00000540756 C12orf45Q8N5I9 185 aaPredicted RBP20.51■□□□□ 0.87
TTC3-225ENST00000540756 FAM222BQ8WU58 562 aa20.51■□□□□ 0.87
TTC3-225ENST00000540756 ERGIC1Q969X5 290 aa20.51■□□□□ 0.87
TTC3-225ENST00000540756 DCTN5Q9BTE1 182 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms