RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 RSBN1Q5VWQ0 802 aaPredicted RBP9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 SYS1Q8N2H4 156 aa9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 STPG2Q8N412 459 aa9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 Q8NFD4 153 aa9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 CNIH3Q8TBE1 160 aa9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 C4orf36Q96KX1 117 aa9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 GON7Q9BXV9 100 aa9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 EXOGQ9Y2C4 368 aaKnown RBP9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 DNAH9Q9NYC9 4486 aa9.46□□□□□ -0.89
CBX3P4-202ENST00000540428 KIAA2026Q5HYC2 2103 aa9.46□□□□□ -0.89
CBX3P4-202ENST00000540428 TMEM212A6NML5 194 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 AP4M1O00189 453 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 HSPB6O14558 160 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 IGKV1D-33P01593 117 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 IGKV1-33P01594 117 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 CCDC159P0C7I6 412 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 RASSF2P50749 326 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 DIAPH2-AS1Q14236 149 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 GALEQ14376 348 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 HNF4GQ14541 408 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 C1orf146Q5VVC0 180 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 TEX38Q6PEX7 206 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 C18orf65Q6ZTR6 163 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 TGIF2LXQ8IUE1 241 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 OR10X1Q8NGY0 326 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 LEAP2Q969E1 77 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 DHDHQ9UQ10 334 aa9.46□□□□□ -0.9
CBX3P4-202ENST00000540428 COL7A1Q02388 2944 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 HSD17B6O14756 317 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 MAGEB3O15480 346 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 MPZL2O60487 215 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 ZFPL1O95159 310 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 IGHV3-7P01780 117 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 GAPDHP04406 335 aaKnown RBP9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 RAB3AP20336 220 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 GZMHP20718 246 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 GNG10P50151 68 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 PNLIPRP3Q17RR3 467 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 ZNF529Q6P280 563 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 ASCL4Q6XD76 172 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 IZUMO1Q8IYV9 350 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 OR52M1Q8NGK5 317 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 OR8U1Q8NH10 309 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 RFESDQ8TAC1 157 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 PLPPR1Q8TBJ4 325 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 MRGPRDQ8TDS7 321 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 LGALS12Q96DT0 336 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 NR1H4Q96RI1 486 aaPredicted RBP9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 ALG8Q9BVK2 526 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 ABCG5Q9H222 651 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 IFT22Q9H7X7 185 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 LIN7CQ9NUP9 197 aaKnown RBP9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 LINC00527Q9UJ94 153 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 ORC6Q9Y5N6 252 aa9.45□□□□□ -0.9
CBX3P4-202ENST00000540428 TENM3Q9P273 2699 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 IGHV1-3A0A0C4DH29 117 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 SAC3D1A6NKF1 404 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 CCL24O00175 119 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 CCRL2O00421 344 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 GABRPO00591 440 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 ALPLP05186 524 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 ELANEP08246 267 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 SSTR5P35346 364 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 GPR12P47775 334 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 CDX1P47902 265 aaPredicted RBP9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 KIR2DS1Q14954 304 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 ZSCAN26Q16670 478 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 LTC4SQ16873 150 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 Q3ZCU0 254 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 CXorf66Q5JRM2 361 aaPredicted RBP9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 NHLRC3Q5JS37 347 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 C9orf66Q5T8R8 295 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 LINC00311Q8N616 119 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 Q8N6K4 173 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 RNF152Q8N8N0 203 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 C8orf31Q8N9H6 132 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 OR5M8Q8NGP6 311 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 OR2T10Q8NGZ9 312 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 OR5AK2Q8NH90 309 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 TNFAIP8L1Q8WVP5 186 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 TFAP2CQ92754 450 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 RAX2Q96IS3 184 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 EAF1Q96JC9 268 aaPredicted RBP9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 GPER1Q99527 375 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 DCLRE1BQ9H816 532 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 FAM118AQ9NWS6 357 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 LSM4Q9Y4Z0 139 aaKnown RBP9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 SIRT4Q9Y6E7 314 aaPredicted RBP9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 RYR3Q15413 4870 aa9.44□□□□□ -0.9
CBX3P4-202ENST00000540428 NCBP2LA6PVI3 153 aaKnown RBP9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 RRP9O43818 475 aaKnown RBP9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 ATP5HO75947 161 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 FADS2O95864 444 aaKnown RBP9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 CD1BP29016 333 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 FOXE3Q13461 319 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 GPR50Q13585 617 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 RSU1Q15404 277 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 PIGYQ3MUY2 71 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 KLHL22Q53GT1 634 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 MOB3BQ86TA1 216 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms