RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CTLA4P16410 223 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 TMEM170AQ8WVE7 144 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 RSPO3Q9BXY4 272 aaPredicted RBP9.69□□□□□ -0.86
PBX1-212ENST00000540236 SERTM1A2A2V5 107 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 DPRXA6NFQ7 191 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 VIPR2P41587 438 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 SLC25A26Q70HW3 274 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 MOB3AQ96BX8 217 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 UTP23Q9BRU9 249 aaKnown RBP9.69□□□□□ -0.86
PBX1-212ENST00000540236 IGFLR1Q9H665 355 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 CHODLQ9H9P2 273 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 A0A0G2JMZ2 1700 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 LRRC37A2A6NM11 1700 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 LRRC37AA6NMS7 1700 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 COL18A1P39060 1754 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 H3BUT2 72 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 RAB31Q13636 194 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 SAXO1Q8IYX7 474 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 SPHK2Q9NRA0 654 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 GLRX2Q9NS18 164 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 CISD1Q9NZ45 108 aaKnown RBP9.69□□□□□ -0.86
PBX1-212ENST00000540236 H3BVH4 76 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 GPR75O95800 540 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 SRIP30626 198 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 RAB9AP51151 201 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 ZNF137PP52743 207 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 GAGE1Q13065 139 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 FAM69BQ5VUD6 431 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 SLC39A11Q8N1S5 342 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 CISD2Q8N5K1 135 aaKnown RBP9.69□□□□□ -0.86
PBX1-212ENST00000540236 IRF7Q92985 503 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 SDF2L1Q9HCN8 221 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 CRIM1Q9NZV1 1036 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 A0A087WWC5 75 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 TRBV5-5A0A0J9YX44 114 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 C1QTNF9BB2RNN3 333 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 H0YGG7 62 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 HNRNPA1P09651 372 aaKnown RBP eCLIP9.68□□□□□ -0.86
PBX1-212ENST00000540236 SLC38A11Q08AI6 406 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 HNRNPA1L2Q32P51 320 aaKnown RBP9.68□□□□□ -0.86
PBX1-212ENST00000540236 OR8B3Q8NGG8 313 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 PPIAL4DF5H284 164 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 PRAMEF26H0Y7S4 382 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 IL2RAP01589 272 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 IGLV3-27P01718 113 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 APCSP02743 223 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 CEBPBP17676 345 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 SRP14P37108 136 aaKnown RBP9.68□□□□□ -0.86
PBX1-212ENST00000540236 TMEM251Q8N6I4 163 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 OR10G8Q8NGN5 311 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 LIPHQ8WWY8 451 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 NEIL1Q96FI4 390 aaPredicted RBP9.68□□□□□ -0.86
PBX1-212ENST00000540236 TMEM106BQ9NUM4 274 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 WNT16Q9UBV4 365 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 SAP30O75446 220 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 GAPDHP04406 335 aaKnown RBP9.68□□□□□ -0.86
PBX1-212ENST00000540236 OR10J4P0C629 311 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 CT45A8P0DMV1 189 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 CT45A9P0DMV2 189 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 HOXC8P31273 242 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 RBM11P57052 281 aaKnown RBP9.68□□□□□ -0.86
PBX1-212ENST00000540236 C2orf27AQ580R0 203 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 CT45A2Q5DJT8 189 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 ZNF506Q5JVG8 444 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 PLA2G2EQ9NZK7 142 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 CACNG5Q9UF02 275 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 SPTBP11277 2137 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 IGHV3-15A0A0B4J1V0 119 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 SERPINE3A8MV23 424 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 CYBAP13498 195 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 AESQ08117 197 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 RIPPLY2Q5TAB7 128 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 ZDHHC23Q8IYP9 409 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 TMEM234Q8WY98 164 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 PLPPR2Q96GM1 343 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 TRAV38-1A0A0B4J264 116 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 HGFACQ04756 655 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 PLPPR5Q32ZL2 321 aa9.68□□□□□ -0.86
PBX1-212ENST00000540236 A0A1B0GU03 582 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 C17orf51A8MQB3 221 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 E9PQ18 207 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 K7EQM0 130 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 CTSDP07339 412 aaPredicted RBP9.67□□□□□ -0.86
PBX1-212ENST00000540236 DEFA4P12838 97 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 HLA-GP17693 338 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 IL11P20809 199 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 TRAT1Q6PIZ9 186 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 LIAT1Q6ZQX7 453 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 CYYR1Q96J86 154 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 LINC00615Q96LM1 132 aaPredicted RBP9.67□□□□□ -0.86
PBX1-212ENST00000540236 ZNF558Q96NG5 402 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 COX11Q9Y6N1 276 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 MTCL1Q9Y4B5 1905 aaKnown RBP9.67□□□□□ -0.86
PBX1-212ENST00000540236 CA2P00918 260 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 MDH2P40926 338 aaKnown RBP9.67□□□□□ -0.86
PBX1-212ENST00000540236 PIGYQ3MUY2 71 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 NINJ1Q92982 152 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 ANGPTL4Q9BY76 406 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 DEC1Q9P2X7 70 aa9.67□□□□□ -0.86
PBX1-212ENST00000540236 TRAV36DV7A0A075B6V5 113 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms