RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SLC35E4Q6ICL7 350 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 MRPL30Q8TCC3 161 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 SMIM4Q8WVI0 70 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 WDR12Q9GZL7 423 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 C12orf4Q9NQ89 552 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 KIF25Q9UIL4 384 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 J3QRK9 145 aa15.67■□□□□ 0.1
TNFRSF1A-213ENST00000540022 ERP29P30040 261 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1A-213ENST00000540022 P2RX3P56373 397 aa15.67■□□□□ 0.1
TNFRSF1A-213ENST00000540022 MRPS10P82664 201 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1A-213ENST00000540022 TRAPPC6BQ86SZ2 158 aa15.67■□□□□ 0.1
TNFRSF1A-213ENST00000540022 OR4K15Q8NH41 348 aa15.67■□□□□ 0.1
TNFRSF1A-213ENST00000540022 SCPEP1Q9HB40 452 aa15.67■□□□□ 0.1
TNFRSF1A-213ENST00000540022 CHMP1AQ9HD42 196 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1A-213ENST00000540022 CLN8Q9UBY8 286 aa15.67■□□□□ 0.1
TNFRSF1A-213ENST00000540022 ZNF230Q9UIE0 474 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1A-213ENST00000540022 TLN2Q9Y4G6 2542 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 TRAV39A0A0B4J263 110 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 TMEM30CPA0ZSE6 113 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 GABARAPH6UMI1 98 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 SULT1C2O00338 296 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 GSTZ1O43708 216 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 LPLP06858 475 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 FCGR3AP08637 254 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 IL2RGP31785 369 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 PPP5CP53041 499 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 MRPS15P82914 257 aaKnown RBP15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 Q8N402 240 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 GVQW1Q8N7I0 195 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 GDPD1Q8N9F7 314 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 CCDC107Q8WV48 283 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 FCAMRQ8WWV6 532 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 DCTN5Q9BTE1 182 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 RIMS4Q9H426 269 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 ZANQ9Y493 2812 aa15.66■□□□□ 0.1
TNFRSF1A-213ENST00000540022 MEIKINA0A087WXM9 373 aa15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 A0A096LNT2 108 aa15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 ODAMA1E959 279 aa15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 MEX3AA1L020 520 aaKnown RBP15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 PHF1O43189 567 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 LANCL1O43813 399 aa15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 FCER2P06734 321 aa15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 BAK1Q16611 211 aa15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 H1FXQ92522 213 aaKnown RBP15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 OCSTAMPQ9BR26 566 aa15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 SSBP3Q9BWW4 388 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 KLK11Q9UBX7 282 aa15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 CSPG4Q6UVK1 2322 aa15.65■□□□□ 0.1
TNFRSF1A-213ENST00000540022 TRBV6-6A0A0A6YYG2 114 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 H7C1Q1 480 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 GPR37O15354 613 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 FOSL1P15407 271 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 RCC1P18754 421 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 USF1P22415 310 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 DTYMKP23919 212 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 CD40LGP29965 261 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 NPY4RP50391 375 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 GNB2P62879 340 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ESCO2Q56NI9 601 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ZNF880Q6PDB4 577 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 OR13A1Q8NGR1 328 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 SETD6Q8TBK2 473 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 MAFIPQ8WZ33 124 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 RAB39BQ96DA2 213 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 THAP7Q9BT49 309 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 C19orf12Q9NSK7 152 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 MTFP1Q9UDX5 166 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 TRAPPC2LQ9UL33 140 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 NF1P21359 2839 aa15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 NIPBLQ6KC79 2804 aaeCLIP15.64■□□□□ 0.09
TNFRSF1A-213ENST00000540022 FUOMA2VDF0 154 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 BTN2A1Q7KYR7 527 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 TCF23Q7RTU1 214 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 CIARTQ8N365 385 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 MAPK1IP1LQ8NDC0 245 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ST6GALNAC5Q9BVH7 336 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 NCOR1P1Q9H4R4 102 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 GSX1Q9H4S2 264 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 Q9N2K0 584 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 MBNL3Q9NUK0 354 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ANAPC10Q9UM13 185 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 RBMX2Q9Y388 322 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 IGKV1D-8A0A087WSZ0 117 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 KIAA1324LA8MWY0 1029 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ORC5O43913 435 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 RBBP9O75884 186 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 ZFP36P26651 326 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 CBX5P45973 191 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 RPL31P62899 125 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 C5orf24Q7Z6I8 188 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 HOGA1Q86XE5 327 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 MRGPRDQ8TDS7 321 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 TRIM63Q969Q1 353 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 IFT46Q9NQC8 304 aa15.63■□□□□ 0.09
TNFRSF1A-213ENST00000540022 NAV3Q8IVL0 2385 aa15.62■□□□□ 0.09
TNFRSF1A-213ENST00000540022 C22orf46C9J442 243 aa15.62■□□□□ 0.09
TNFRSF1A-213ENST00000540022 FAM157AC9JC47 383 aa15.62■□□□□ 0.09
TNFRSF1A-213ENST00000540022 RNF223E7ERA6 249 aa15.62■□□□□ 0.09
TNFRSF1A-213ENST00000540022 GDNFP39905 211 aa15.62■□□□□ 0.09
TNFRSF1A-213ENST00000540022 GLP1RP43220 463 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms