RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 SHISA7A6NL88 538 aa11.24□□□□□ -0.61
MSH6-210ENST00000540021 ZNF729A6NN14 1252 aaPredicted RBP11.24□□□□□ -0.61
MSH6-210ENST00000540021 SYNGR4O95473 234 aa11.24□□□□□ -0.61
MSH6-210ENST00000540021 HOXA5P20719 270 aa11.24□□□□□ -0.61
MSH6-210ENST00000540021 RABEPKQ7Z6M1 372 aa11.24□□□□□ -0.61
MSH6-210ENST00000540021 ZNF501Q96CX3 271 aaPredicted RBP11.24□□□□□ -0.61
MSH6-210ENST00000540021 SAMD10Q9BYL1 202 aa11.24□□□□□ -0.61
MSH6-210ENST00000540021 CLEC18AA5D8T8 446 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 ZNF737O75373 536 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 CDS2O95674 445 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 BCL3P20749 454 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 DTYMKP23919 212 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 ZNF92Q03936 586 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 RHBDD2Q6NTF9 364 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 CLEC18CQ8NCF0 446 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 ATP5SQ99766 215 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 NUDT16L1Q9BRJ7 211 aaKnown RBP11.23□□□□□ -0.61
MSH6-210ENST00000540021 MRPL13Q9BYD1 178 aaKnown RBP11.23□□□□□ -0.61
MSH6-210ENST00000540021 AKIRIN1Q9H9L7 192 aaPredicted RBP11.23□□□□□ -0.61
MSH6-210ENST00000540021 GPR27Q9NS67 375 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 FOLR2P14207 255 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 ANOS1P23352 680 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 IL2RGP31785 369 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 GALR1P47211 349 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 OR51I2Q9H344 312 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 UCK1Q9HA47 277 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 KCNIP1Q9NZI2 227 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 TUBD1Q9UJT1 453 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 NCOR1O75376 2440 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 ZNF320A2RRD8 509 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 DEGS1O15121 323 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 RPL29P47914 159 aaKnown RBP11.23□□□□□ -0.61
MSH6-210ENST00000540021 PHYHD1Q5SRE7 291 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 C10orf91Q5T1B1 145 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 KCNIP4Q6PIL6 250 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 POC1BQ8TC44 478 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 HLA-CQ95604 372 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 FUT9Q9Y231 359 aa11.23□□□□□ -0.61
MSH6-210ENST00000540021 HIST1H2BKO60814 126 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 HIST1H2BJP06899 126 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 HIST1H2BOP23527 126 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 HIST1H2BBP33778 126 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 HIST1H2BDP58876 126 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 HIST1H2BCP62807 126 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 CCL7P80098 99 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 ZNF816Q0VGE8 651 aaPredicted RBP11.22□□□□□ -0.61
MSH6-210ENST00000540021 HIST2H2BEQ16778 126 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.22□□□□□ -0.61
MSH6-210ENST00000540021 HIST1H2BHQ93079 126 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 HIST1H2BNQ99877 126 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 HIST1H2BMQ99879 126 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 C12orf49Q9H741 205 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 A0A0U1RQV5 110 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 SRP19P09132 144 aaKnown RBP11.22□□□□□ -0.61
MSH6-210ENST00000540021 PSG2P11465 335 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 PAX6P26367 422 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 CDPF1Q6NVV7 123 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 HEPN1Q6WQI6 88 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 OR10A7Q8NGE5 316 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 TMEM222Q9H0R3 208 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 TINAGQ9UJW2 476 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 PITX3O75364 302 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 GRPP07492 148 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 FOLR3P41439 243 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 ERVFRD-1P60508 538 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 PKIAP61925 76 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 TGFBR3Q03167 851 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 TMEM241Q24JQ0 296 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 TRIOBPQ9H2D6 2365 aa11.22□□□□□ -0.61
MSH6-210ENST00000540021 A0A0J9YW62 118 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 CFPP27918 469 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 PRDX4Q13162 271 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 ZNF574Q6ZN55 896 aaPredicted RBP11.21□□□□□ -0.61
MSH6-210ENST00000540021 ZNF818PQ6ZRF7 136 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 MOB3AQ96BX8 217 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 CCDC74BQ96LY2 380 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 ARV1Q9H2C2 271 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 CLEC1BQ9P126 229 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 OR6C6A6NF89 314 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 TCAPO15273 167 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 APLNRP35414 380 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 CLDN15P56746 228 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 LPAL2Q16609 132 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 BSXQ3C1V8 233 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 HIKESHIQ53FT3 197 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 SYT13Q7L8C5 426 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 TMEM18Q96B42 140 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 C1orf147Q96MC9 270 aaPredicted RBP11.21□□□□□ -0.61
MSH6-210ENST00000540021 FBLN5Q9UBX5 448 aa11.21□□□□□ -0.61
MSH6-210ENST00000540021 A0A1W2PNV4 684 aa11.21□□□□□ -0.62
MSH6-210ENST00000540021 RPS2P15880 293 aaKnown RBP11.21□□□□□ -0.62
MSH6-210ENST00000540021 IL24Q13007 206 aa11.21□□□□□ -0.62
MSH6-210ENST00000540021 ZDHHC23Q8IYP9 409 aa11.21□□□□□ -0.62
MSH6-210ENST00000540021 CLDN23Q96B33 292 aa11.21□□□□□ -0.62
MSH6-210ENST00000540021 TUBA4BQ9H853 241 aa11.21□□□□□ -0.62
MSH6-210ENST00000540021 RNF122Q9H9V4 155 aa11.21□□□□□ -0.62
MSH6-210ENST00000540021 ELOA3CA0A087WX78 387 aaPredicted RBP11.2□□□□□ -0.62
MSH6-210ENST00000540021 FAM166BA8MTA8 275 aa11.2□□□□□ -0.62
MSH6-210ENST00000540021 GDF9O60383 454 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms