RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ZNF524Q96C55 264 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 SLC25A36Q96CQ1 311 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 ARHGAP5-AS1Q96IT6 56 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 C18orf12Q96KH6 178 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 PECRQ9BY49 303 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 MRPL13Q9BYD1 178 aaKnown RBP6.62□□□□□ -1.35
CCDC60-204ENST00000539847 SLC25A31Q9H0C2 315 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 C11orf1Q9H5F2 150 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF552Q9H707 407 aaPredicted RBP6.62□□□□□ -1.35
CCDC60-204ENST00000539847 NAA60Q9H7X0 242 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 SDHAF3Q9NRP4 125 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 SOHLH2Q9NX45 425 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 EHFQ9NZC4 300 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 DKKL1Q9UK85 242 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 PITPNC1Q9UKF7 332 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 NPIPA1Q9UND3 350 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 CSMD1Q96PZ7 3565 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 PKDREJQ9NTG1 2253 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 SVILO95425 2214 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 ITPR3Q14573 2671 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 TNRC6AQ8NDV7 1962 aaKnown RBP6.61□□□□□ -1.35
CCDC60-204ENST00000539847 A0A0U1RQV5 110 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 A0A1W2PPE2 198 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 FAM230AA0A1W2PPH8 454 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 OR5H15A6NDH6 313 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 OR5H1A6NKK0 313 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 DHRS7CA6NNS2 312 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 TMEM150CB9EJG8 249 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF878C9JN71 531 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 H3BQ15 152 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 SMAD9O15198 467 aaKnown RBP6.61□□□□□ -1.35
CCDC60-204ENST00000539847 PRH1P02810 166 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 HEXBP07686 556 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 PGA3P0DJD8 388 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 NR2C1P13056 603 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 BTF3P20290 206 aaKnown RBP6.61□□□□□ -1.35
CCDC60-204ENST00000539847 IL12BP29460 328 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 DDTP30046 118 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 SFTPDP35247 375 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 GABRA4P48169 554 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 NDUFA6P56556 154 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 UBE2KP61086 200 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 HSF1Q00613 529 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 BAXQ07812 192 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 GNMTQ14749 295 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 ELOBQ15370 118 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 SRSF7Q16629 238 aaKnown RBP eCLIP6.61□□□□□ -1.35
CCDC60-204ENST00000539847 SLC25A53Q5H9E4 307 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 LCN10Q6JVE6 187 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 RHBDD2Q6NTF9 364 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 MRPL52Q86TS9 123 aaKnown RBP6.61□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF441Q8N8Z8 693 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 GATSQ8NAP1 163 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 TMEM104Q8NE00 496 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 SEMA6DQ8NFY4 1073 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 OR51T1Q8NGJ9 327 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 OR13C9Q8NGT0 318 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 OR2AJ1Q8NGZ0 328 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 OR14K1Q8NGZ2 314 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 OR1L3Q8NH93 324 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 CD300LFQ8TDQ1 290 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF721Q8TF20 911 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 DAZLQ92904 295 aaKnown RBP6.61□□□□□ -1.35
CCDC60-204ENST00000539847 ERGIC1Q969X5 290 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 ISOC2Q96AB3 205 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 ADOQ96SZ5 270 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 WDR77Q9BQA1 342 aaPredicted RBP6.61□□□□□ -1.35
CCDC60-204ENST00000539847 PIGQQ9BRB3 760 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 ST6GALNAC5Q9BVH7 336 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 ACTR3CQ9C0K3 210 aaPredicted RBP6.61□□□□□ -1.35
CCDC60-204ENST00000539847 PLEKHF2Q9H8W4 249 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 WFDC1Q9HC57 220 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 FAM60AQ9NP50 221 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 CHST11Q9NPF2 352 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 GPR84Q9NQS5 396 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 LANCL2Q9NS86 450 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 CENPMQ9NSP4 180 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 DCAF16Q9NXF7 216 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 P4HTMQ9NXG6 502 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 HIVEP1P15822 2718 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 ADGRG4Q8IZF6 3080 aa6.61□□□□□ -1.35
CCDC60-204ENST00000539847 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 NSG1A0A0A6YYJ2 146 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 H3BMH7 237 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 H3BSH0 61 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 LMX1BO60663 402 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 HIST1H2BKO60814 126 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 PITX3O75364 302 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 CRTAPO75718 401 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-204ENST00000539847 YIF1AO95070 293 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 MPZL1O95297 269 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 ONECUT2O95948 504 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 CRYABP02511 175 aaKnown RBP6.6□□□□□ -1.35
CCDC60-204ENST00000539847 OPN1MWP04001 364 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 ARG1P05089 322 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 HIST1H2BJP06899 126 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 OPN1MW2P0DN77 364 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 OPN1MW3P0DN78 364 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 OR5H8P0DN80 308 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 ST6GAL1P15907 406 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms