RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 FOXRED2Q8IWF2 684 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 OR56B4Q8NH76 319 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 MRGPRDQ8TDS7 321 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 ZNF649Q9BS31 505 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 MCRIP2Q9BUT9 160 aaKnown RBP12.19□□□□□ -0.46
UBE3B-211ENST00000539843 AMBNQ9NP70 447 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 CKLFQ9UBR5 152 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 LOC100130705A0A1B0GUX0 176 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 TMEM30CPA0ZSE6 113 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 SERPINE3A8MV23 424 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 NUDT19A8MXV4 375 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 LY6LH3BQJ8 138 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 GABRPO00591 440 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 FGF16O43320 207 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 OR7C1O76099 320 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-211ENST00000539843 MYL12AP19105 171 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 GZMHP20718 246 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 GNG10P50151 68 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 PAX5Q02548 391 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 STX19Q8N4C7 294 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 COMMD1Q8N668 190 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 DRAM1Q8N682 238 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 OR52I1Q8NGK6 324 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 OR13A1Q8NGR1 328 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 RHOXF1Q8NHV9 184 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 NEK7Q8TDX7 302 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 DPCDQ9BVM2 203 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-211ENST00000539843 TMEM138Q9NPI0 162 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 CHCHD3Q9NX63 227 aaKnown RBP12.18□□□□□ -0.46
UBE3B-211ENST00000539843 TAS2R4Q9NYW5 299 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 ING4Q9UNL4 249 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 ST3GAL6Q9Y274 331 aa12.18□□□□□ -0.46
UBE3B-211ENST00000539843 TRAV24A0A0B4J272 114 aa12.17□□□□□ -0.46
UBE3B-211ENST00000539843 SH2D7A6NKC9 451 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-211ENST00000539843 GABRB1P18505 474 aa12.17□□□□□ -0.46
UBE3B-211ENST00000539843 DCKP27707 260 aa12.17□□□□□ -0.46
UBE3B-211ENST00000539843 ZNF93P35789 620 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-211ENST00000539843 GPR176Q14439 515 aa12.17□□□□□ -0.46
UBE3B-211ENST00000539843 DDI2Q5TDH0 399 aa12.17□□□□□ -0.46
UBE3B-211ENST00000539843 RSBN1Q5VWQ0 802 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-211ENST00000539843 RFESDQ8TAC1 157 aa12.17□□□□□ -0.46
UBE3B-211ENST00000539843 TMEM106AQ96A25 262 aa12.17□□□□□ -0.46
UBE3B-211ENST00000539843 GON7Q9BXV9 100 aa12.17□□□□□ -0.46
UBE3B-211ENST00000539843 AASSQ9UDR5 926 aa12.17□□□□□ -0.46
UBE3B-211ENST00000539843 PSG11Q9UQ72 335 aa12.17□□□□□ -0.46
UBE3B-211ENST00000539843 NPIPB11E5RHQ5 1161 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 E9PI62 339 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 H3BNX3 289 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 HSD17B6O14756 317 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 IGKV1D-33P01593 117 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 IGKV1-33P01594 117 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 IGHV3-7P01780 117 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 GAPDHP04406 335 aaKnown RBP12.16□□□□□ -0.46
UBE3B-211ENST00000539843 BDKRB2P30411 391 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 MPV17LQ2QL34 196 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 PIGYQ3MUY2 71 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 DEFB121Q5J5C9 76 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 TCTEX1D4Q5JR98 221 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 ATAD3CQ5T2N8 411 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 RNF144BQ7Z419 303 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 SLC35E3Q7Z769 313 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 SUMF2Q8NBJ7 301 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 OR51A2Q8NGJ7 313 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 OR10K1Q8NGX5 313 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 OR52N1Q8NH53 320 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 LEAP2Q969E1 77 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 LINC00574Q9H8X3 128 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 SPACA1Q9HBV2 294 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 ZFP57Q9NU63 452 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 MRPS18AQ9NVS2 196 aaKnown RBP12.16□□□□□ -0.46
UBE3B-211ENST00000539843 IL36GQ9NZH8 169 aa12.16□□□□□ -0.46
UBE3B-211ENST00000539843 FAM90A18PA6NE21 464 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 FAM90A16PA6NEW6 464 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 FAM90A20PA6NIJ5 464 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 FAM90A9PA6NNJ1 464 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 FAM90A12PA8MX19 464 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 FAM90A5PA8MXJ8 464 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 CCRL2O00421 344 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 AMY1AP04745 511 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 AMY2AP04746 511 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 FAM90A15PP0C7V4 464 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 FAM90A13PP0C7W8 464 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 FAM90A14PP0C7W9 464 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 FAM90A24PP0C7X0 464 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 CGB3P0DN86 165 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 CGB7P0DN87 165 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 GTF2F2P13984 249 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 SERPINA2P20848 420 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 SSTR5P35346 364 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 RBM11P57052 281 aaKnown RBP12.15□□□□□ -0.46
UBE3B-211ENST00000539843 RIPK1Q13546 671 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 HNF4GQ14541 408 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 NHLRC3Q5JS37 347 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 ZNF529Q6P280 563 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 UNQ9370/PRO34162Q6UXP9 181 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 MOB3BQ86TA1 216 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 C5orf56Q8N8D9 126 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 Q8NFD4 153 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 RDH12Q96NR8 316 aa12.15□□□□□ -0.46
UBE3B-211ENST00000539843 IFT22Q9H7X7 185 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms