RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ERVS71-1P61550 626 aa12.02□□□□□ -0.49
UBE3B-210ENST00000539599 PLGLB1Q02325 96 aa12.02□□□□□ -0.49
UBE3B-210ENST00000539599 ABHD17BQ5VST6 288 aa12.02□□□□□ -0.49
UBE3B-210ENST00000539599 PEAR1Q5VY43 1037 aaPredicted RBP12.02□□□□□ -0.49
UBE3B-210ENST00000539599 TMEM211Q6ICI0 200 aa12.02□□□□□ -0.49
UBE3B-210ENST00000539599 SELENOHQ8IZQ5 122 aaKnown RBP12.02□□□□□ -0.49
UBE3B-210ENST00000539599 SYT3Q9BQG1 590 aa12.02□□□□□ -0.49
UBE3B-210ENST00000539599 PRDM14Q9GZV8 571 aa12.02□□□□□ -0.49
UBE3B-210ENST00000539599 TMEM222Q9H0R3 208 aa12.02□□□□□ -0.49
UBE3B-210ENST00000539599 RGCCQ9H4X1 137 aa12.02□□□□□ -0.49
UBE3B-210ENST00000539599 IL36GQ9NZH8 169 aa12.02□□□□□ -0.49
UBE3B-210ENST00000539599 OR1A1Q9P1Q5 309 aa12.02□□□□□ -0.49
UBE3B-210ENST00000539599 BOKQ9UMX3 212 aaPredicted RBP12.02□□□□□ -0.49
UBE3B-210ENST00000539599 A0A1W2PPE2 198 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 B4E171 279 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 TRDCB7Z8K6 153 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 PROB1E7EW31 1015 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 HOXA6P31267 233 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 TSPAN7P41732 249 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 ZNF154Q13106 437 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 KRBOX4Q5JUW0 171 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 OR2C3Q8N628 320 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 ZNF565Q8N9K5 539 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 ATP6V0CP27449 155 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 NKX2-1P43699 371 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-210ENST00000539599 SNRPEP62304 92 aaKnown RBP12.01□□□□□ -0.49
UBE3B-210ENST00000539599 HABP2Q14520 560 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-210ENST00000539599 TMPRSS7Q7RTY8 843 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 LRTM2Q8N967 370 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 SUMF2Q8NBJ7 301 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 CCDC54Q8NEL0 328 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 OR5C1Q8NGR4 320 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 GINS3Q9BRX5 216 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 FBXO9Q9UK97 447 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-210ENST00000539599 POMT1Q9Y6A1 747 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 MAP1BP46821 2468 aaKnown RBP12.01□□□□□ -0.49
UBE3B-210ENST00000539599 CD300LBA8K4G0 201 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 TK1P04183 234 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 ALKBH6Q3KRA9 238 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 AVPI1Q5T686 147 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 ARV1Q9H2C2 271 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 ZNF175Q9Y473 711 aa12.01□□□□□ -0.49
UBE3B-210ENST00000539599 BORCS7-ASMTA0A0B4J1R7 106 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 C7orf77A4D0Y5 90 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 TRAPPC2LH3BP13 241 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 NAPSAO96009 420 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 ACP1P24666 158 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 MPLP40238 635 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 DYNLT3P51808 116 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 FGF12P61328 243 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 PMP22Q01453 160 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 GNMTQ14749 295 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 OR2G3Q8NGZ4 309 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 LYPD6BQ8NI32 183 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 FAM173AQ9BQD7 235 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 CNOT1A5YKK6 2376 aaKnown RBP12□□□□□ -0.49
UBE3B-210ENST00000539599 ARHGAP21Q5T5U3 1957 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 TRAV24A0A0B4J272 114 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 NUDT19A8MXV4 375 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 CEBPDP49716 269 aaPredicted RBP12□□□□□ -0.49
UBE3B-210ENST00000539599 TLE1Q04724 770 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 TMEM267Q0VDI3 215 aaPredicted RBP12□□□□□ -0.49
UBE3B-210ENST00000539599 HAGHQ16775 308 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 CEACAM21Q3KPI0 293 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 DCAF10Q5QP82 559 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 DHRS13Q6UX07 377 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 RBMS3Q6XE24 437 aaKnown RBP12□□□□□ -0.49
UBE3B-210ENST00000539599 CCDC71LQ8N9Z2 235 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 APH1AQ96BI3 265 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 POM121L2Q96KW2 1035 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 C12orf57Q99622 126 aa12□□□□□ -0.49
UBE3B-210ENST00000539599 RP1L1Q8IWN7 2480 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-210ENST00000539599 TMEM265A0A087WTH1 108 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 UMAD1C9J7I0 102 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 RNFT1Q5M7Z0 435 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 PLPPR1Q8TBJ4 325 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 HIST1H2BAQ96A08 127 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 LUZP4Q9P127 313 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 TMED3Q9Y3Q3 217 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 PUS1Q9Y606 427 aaKnown RBP eCLIP11.99□□□□□ -0.49
UBE3B-210ENST00000539599 ZNF98A6NK75 572 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 SIRPB1O00241 398 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 CHST1O43916 411 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 SYNGR4O95473 234 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 MT-CO3P00414 261 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 IGHEP01854 428 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 SEC11BP0C7V7 166 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 PSG2P11465 335 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 PCSK4Q6UW60 755 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-210ENST00000539599 FAM24BQ8N5W8 94 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 TMEM252Q8N6L7 170 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 MRPL30Q8TCC3 161 aaKnown RBP11.99□□□□□ -0.49
UBE3B-210ENST00000539599 TAAR9Q96RI9 348 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 C11orf1Q9H5F2 150 aa11.99□□□□□ -0.49
UBE3B-210ENST00000539599 ERRFI1Q9UJM3 462 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-210ENST00000539599 IGKV3D-15A0A087WSY6 115 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 IL18BPO95998 194 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 MEOX1P50221 254 aa11.98□□□□□ -0.49
UBE3B-210ENST00000539599 UCP3P55916 312 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms