RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 MYO7BQ6PIF6 2116 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 GGNQ86UU5 652 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 REPIN1Q9BWE0 567 aaKnown RBP11.39□□□□□ -0.59
UBE3B-209ENST00000539584 GLRX2Q9NS18 164 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 OCIAD1Q9NX40 245 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 P4HTMQ9NXG6 502 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 WNT16Q9UBV4 365 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 HS3ST3B1Q9Y662 390 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 CEP192Q8TEP8 1941 aa11.39□□□□□ -0.59
UBE3B-209ENST00000539584 CDRT15L2A8MXV6 281 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 CHST1O43916 411 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 KLF7O75840 302 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-209ENST00000539584 OMGP23515 440 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 ITGA3P26006 1051 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 PMS2P11Q13670 270 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 DAZAP2Q15038 168 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-209ENST00000539584 ACER2Q5QJU3 275 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 ADGRG7Q96K78 797 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 ALKBH3Q96Q83 286 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-209ENST00000539584 PSMG3Q9BT73 122 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-209ENST00000539584 AKIRIN1Q9H9L7 192 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-209ENST00000539584 CISD1Q9NZ45 108 aaKnown RBP11.38□□□□□ -0.59
UBE3B-209ENST00000539584 DOK5Q9P104 306 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 LOC102723971A0A1B0GUV8 181 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 CYTIPO60759 359 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 NDUFS6O75380 124 aaKnown RBP11.38□□□□□ -0.59
UBE3B-209ENST00000539584 EDN3P14138 238 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 F2RP25116 425 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 SERF2P84101 59 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 HAGHQ16775 308 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 RSPO4Q2I0M5 234 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-209ENST00000539584 ZNF674Q2M3X9 581 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 CEACAM21Q3KPI0 293 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 NCMAPQ5T1S8 102 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 CYB561D1Q8N8Q1 229 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 SUMF1Q8NBK3 374 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 PLPPR1Q8TBJ4 325 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 Q8WTZ3 238 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 EDARADDQ8WWZ3 215 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 LINC00470Q9BZP3 86 aa11.38□□□□□ -0.59
UBE3B-209ENST00000539584 A0A1B0GV50 99 aa11.37□□□□□ -0.59
UBE3B-209ENST00000539584 CELA2AP08217 269 aa11.37□□□□□ -0.59
UBE3B-209ENST00000539584 NTF4P34130 210 aa11.37□□□□□ -0.59
UBE3B-209ENST00000539584 CXCL12P48061 93 aa11.37□□□□□ -0.59
UBE3B-209ENST00000539584 ASCL1P50553 236 aa11.37□□□□□ -0.59
UBE3B-209ENST00000539584 RND2P52198 227 aa11.37□□□□□ -0.59
UBE3B-209ENST00000539584 ODF3L1Q8IXM7 274 aa11.37□□□□□ -0.59
UBE3B-209ENST00000539584 MBD3L1Q8WWY6 194 aa11.37□□□□□ -0.59
UBE3B-209ENST00000539584 LSM10Q969L4 123 aaKnown RBP11.37□□□□□ -0.59
UBE3B-209ENST00000539584 ABHD14AQ9BUJ0 271 aa11.37□□□□□ -0.59
UBE3B-209ENST00000539584 PARD6GQ9BYG4 376 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-209ENST00000539584 CTDSP1Q9GZU7 261 aa11.37□□□□□ -0.59
UBE3B-209ENST00000539584 ZNF587BE7ETH6 402 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 TRAPPC2LH3BP13 241 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 CXCL13O43927 109 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 PGLYRP1O75594 196 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-209ENST00000539584 CST7O76096 145 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 CNOT4O95628 575 aaKnown RBP11.36□□□□□ -0.59
UBE3B-209ENST00000539584 SCTP09683 121 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 PAX9P55771 341 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 ZDHHC23Q8IYP9 409 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 OR5A2Q8NGI9 324 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 OR10D3Q8NH80 312 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 SCGB1C1Q8TD33 95 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 CLDN23Q96B33 292 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 PINX1Q96BK5 328 aaKnown RBP11.36□□□□□ -0.59
UBE3B-209ENST00000539584 MAGT1Q9H0U3 335 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 OR2W1Q9Y3N9 320 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 ABCA7Q8IZY2 2146 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 IGKV3D-15A0A087WSY6 115 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 NPIPB11E5RHQ5 1161 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 H0YL77 283 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 CLDN34H7C241 214 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 PPP1R2P9O14990 202 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 TMEM50AO95807 157 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 CYB5R3P00387 301 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-209ENST00000539584 BCL3P20749 454 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 CD200P41217 278 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 NOVA1P51513 510 aaKnown RBP11.36□□□□□ -0.59
UBE3B-209ENST00000539584 NDUFA6P56556 154 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 NKX6-1P78426 367 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-209ENST00000539584 LYSMD4Q5XG99 296 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 C1orf87Q8N0U7 546 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 NOSIPQ9Y314 301 aaKnown RBP11.36□□□□□ -0.59
UBE3B-209ENST00000539584 MMP24Q9Y5R2 645 aa11.36□□□□□ -0.59
UBE3B-209ENST00000539584 MED19A0JLT2 244 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-209ENST00000539584 K7ESF4 209 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 SERPINE2P07093 398 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 PATE4P0C8F1 98 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 FOLR3P41439 243 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HAAOP46952 286 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 PRDX4Q13162 271 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HERPUD1Q15011 391 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 SLC25A24Q6NUK1 477 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 ZNF880Q6PDB4 577 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 YRDCQ86U90 279 aaKnown RBP11.35□□□□□ -0.59
UBE3B-209ENST00000539584 TMEM217Q8N7C4 229 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 NAXEQ8NCW5 288 aa11.35□□□□□ -0.59
UBE3B-209ENST00000539584 APOBEC3DQ96AK3 386 aaPredicted RBP11.35□□□□□ -0.59
UBE3B-209ENST00000539584 HIST1H2AAQ96QV6 131 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms