RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CST7O76096 145 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 CTXN2P0C2S0 81 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 EDN3P14138 238 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 EPHA1P21709 976 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 PAX9P55771 341 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 TAS2R30P59541 319 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 ZNF610Q8N9Z0 462 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 OR5D13Q8NGL4 314 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 Q8WTZ3 238 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 CPNE4Q96A23 557 aaPredicted RBP8.3□□□□□ -1.08
CDH13-204ENST00000539548 ALKBH3Q96Q83 286 aaPredicted RBP8.3□□□□□ -1.08
CDH13-204ENST00000539548 ATP5SQ99766 215 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 BCL2L14Q9BZR8 327 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 PRDM14Q9GZV8 571 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 RNF115Q9Y4L5 304 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 MMP24Q9Y5R2 645 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 HS3ST3B1Q9Y662 390 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 SDK1Q7Z5N4 2213 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 NCOR1O75376 2440 aa8.3□□□□□ -1.08
CDH13-204ENST00000539548 TMEM265A0A087WTH1 108 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 IGKV1D-13A0A0B4J2D9 117 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 KIR2DS1A0A191URI9 304 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 B4DEV8 164 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 WRBO00258 174 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 KLK3P07288 261 aaPredicted RBP8.29□□□□□ -1.08
CDH13-204ENST00000539548 MMP7P09237 267 aaPredicted RBP8.29□□□□□ -1.08
CDH13-204ENST00000539548 CXCL1P09341 107 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 SCTP09683 121 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 IGKV1-13P0DP09 117 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 BCL3P20749 454 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 KIR2DS4P43632 304 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 NDUFA6P56556 154 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 KIR2DS1Q14954 304 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 RNPS1Q15287 305 aaKnown RBP8.29□□□□□ -1.08
CDH13-204ENST00000539548 OR8G1Q15617 311 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 ZNF674Q2M3X9 581 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 ABLIM2Q6H8Q1 611 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 COLCA1Q6ZS62 124 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 YRDCQ86U90 279 aaKnown RBP8.29□□□□□ -1.08
CDH13-204ENST00000539548 CYB561D1Q8N8Q1 229 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 AGBL5Q8NDL9 886 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 SAP25Q8TEE9 199 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 SGCZQ96LD1 299 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 NIPSNAP3BQ9BS92 247 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 DOK5Q9P104 306 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 NCKAP5O14513 1909 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 H0Y980 276 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 CXCL13O43927 109 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 DFFBO76075 338 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 S100A2P29034 98 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 ERVFRD-1P60508 538 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 FGF12P61328 243 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 RPL23AP62750 156 aaKnown RBP8.29□□□□□ -1.08
CDH13-204ENST00000539548 RUNX1Q01196 453 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 ZNF154Q13106 437 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 HERPUD1Q15011 391 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 ZNF468Q5VIY5 522 aaPredicted RBP8.29□□□□□ -1.08
CDH13-204ENST00000539548 ZNF343Q6P1L6 599 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 C5orf24Q7Z6I8 188 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 CMTM1Q8IZ96 169 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 TMEM217Q8N7C4 229 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 OR13D1Q8NGV5 346 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 ADGRG7Q96K78 797 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 CALHM2Q9HA72 323 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 CCL28Q9NRJ3 127 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 GAR1Q9NY12 217 aaKnown RBP8.29□□□□□ -1.08
CDH13-204ENST00000539548 TAAR3PQ9P1P4 343 aa8.29□□□□□ -1.08
CDH13-204ENST00000539548 CACNA1EQ15878 2313 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 PIGBOS1A0A0B4J2F0 54 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 LOC102723971A0A1B0GUV8 181 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 ZNF729A6NN14 1252 aaPredicted RBP8.28□□□□□ -1.08
CDH13-204ENST00000539548 GDF9O60383 454 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 SLC25A6P12236 298 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 CEBPGP53567 150 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 HLA-DRB3P79483 266 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 MPV17LQ2QL34 196 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 NRN1LQ496H8 165 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 OR2B11Q5JQS5 317 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 CPEB3Q8NE35 698 aaKnown RBP8.28□□□□□ -1.08
CDH13-204ENST00000539548 OR2V1Q8NHB1 315 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 RYDENQ9NUL5 291 aaKnown RBP8.28□□□□□ -1.08
CDH13-204ENST00000539548 TREM2Q9NZC2 230 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 ATP23Q9Y6H3 246 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 TNRC6BQ9UPQ9 1833 aaKnown RBP8.28□□□□□ -1.08
CDH13-204ENST00000539548 IGKV1-6A0A0C4DH72 117 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 SEC14L6B5MCN3 397 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 C9J4A7 227 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 K7ESF4 209 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 HIST1H2BKO60814 126 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 PGLYRP1O75594 196 aaPredicted RBP8.28□□□□□ -1.08
CDH13-204ENST00000539548 F10P00742 488 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 P04436 131 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 HIST1H2BJP06899 126 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 HIST1H2BOP23527 126 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 HIST1H2BBP33778 126 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 HIST1H2BDP58876 126 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 HIST1H2BCP62807 126 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 PRDX4Q13162 271 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 HIST2H2BEQ16778 126 aa8.28□□□□□ -1.08
CDH13-204ENST00000539548 PYY3Q5JQD4 70 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms