RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 UBE2QL1A1L167 161 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 MEIOCA2RUB1 952 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 LDLRAD4O15165 306 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 SOCS1O15524 211 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 HOXA3O43365 443 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-206ENST00000539417 CLPXO76031 633 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 MELTFP08582 738 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 ARSBP15848 533 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 CDK2P24941 298 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 EFNB2P52799 333 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 BPIFB3P59826 476 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 PAX5Q02548 391 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 BAMBIQ13145 260 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 SLC9A3R2Q15599 337 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 Q6YL49 198 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 LHFPL4Q7Z7J7 247 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 DYNAPQ8N1N2 210 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-206ENST00000539417 FAM3DQ96BQ1 224 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 SULT4A1Q9BR01 284 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 TM2D1Q9BX74 207 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 TMEM59Q9BXS4 323 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 BARHL1Q9BZE3 327 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 ZNRD1Q9P1U0 126 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 STEAP1Q9UHE8 339 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 SESN1Q9Y6P5 492 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 COL6A5A8TX70 2615 aa12.81□□□□□ -0.36
RPAIN-206ENST00000539417 A0A0A6YYJ9 748 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 TMEM272A0A1B0GTI8 110 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A10PA6NDY2 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A18PA6NE21 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A16PA6NEW6 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A20PA6NIJ5 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A8PA6NJQ4 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A7PA6NKC0 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 IFITM5A6NNB3 132 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A22PA8MWA6 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A12PA8MX19 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A5PA8MXJ8 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A23PA8MXZ1 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 RBP4P02753 201 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 MT-ND4P03905 459 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A15PP0C7V4 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A13PP0C7W8 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A14PP0C7W9 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FAM90A24PP0C7X0 464 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 CHATP28329 748 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 SDC2P34741 201 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 SSTR5P35346 364 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 UBA52P62987 128 aaKnown RBP12.8□□□□□ -0.36
RPAIN-206ENST00000539417 GUCA2AQ02747 115 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 MXD1Q05195 221 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 NKAPLQ5M9Q1 402 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 SLC35E4Q6ICL7 350 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 ZNF497Q6ZNH5 498 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 Q6ZPA2 131 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 C6orf201Q7Z4U5 140 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 RFESDQ8TAC1 157 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 KCNG3Q8TAE7 436 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 NEK7Q8TDX7 302 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 HEXA-AS1Q9H8Q6 139 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 TAS2R3Q9NYW6 316 aa12.8□□□□□ -0.36
RPAIN-206ENST00000539417 FUOMA2VDF0 154 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 FOXI3A8MTJ6 420 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-206ENST00000539417 RNF212BA8MTL3 300 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 ODF3BA8MYP8 253 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 MCRIP1C9JLW8 97 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 PDCD5O14737 125 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 PDCD6O75340 191 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 FUT3P21217 361 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 KCNJ3P48549 501 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 LSM3P62310 102 aaKnown RBP12.79□□□□□ -0.36
RPAIN-206ENST00000539417 LTC4SQ16873 150 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 HEPN1Q6WQI6 88 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 OR4K15Q8NH41 348 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 LEAP2Q969E1 77 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 ZDHHC16Q969W1 377 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 FAAP24Q9BTP7 215 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 TMEM133Q9H2Q1 129 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 ZNF286AQ9HBT8 521 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 CALYQ9NYX4 217 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 SCOCQ9UIL1 159 aa12.79□□□□□ -0.36
RPAIN-206ENST00000539417 IGHV2-26A0A0B4J1V2 119 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 KBTBD11-OT1A0A1B0GTJ5 212 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 hCG_1809904A0A1W2PP81 198 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 A0A1W2PPE2 198 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 A0A1W2PR64 198 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 A0A1W2PRV1 198 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 TMEM30CPA0ZSE6 113 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 ZNF729A6NN14 1252 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-206ENST00000539417 IGHV3-7P01780 117 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 IGHV4-59P01825 116 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 ARG1P05089 322 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 CFPP27918 469 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 TMEM50BP56557 158 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 MOGAT2Q3SYC2 334 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 ZNF626Q68DY1 528 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 RBMS3Q6XE24 437 aaKnown RBP12.78□□□□□ -0.36
RPAIN-206ENST00000539417 OR2W3Q7Z3T1 314 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 FAM89BQ8N5H3 189 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms