RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 BDKRB2P30411 391 aa17.74■□□□□ 0.43
SCARB1-206ENST00000539320 ZNF93P35789 620 aaPredicted RBP17.74■□□□□ 0.43
SCARB1-206ENST00000539320 RBM11P57052 281 aaKnown RBP17.74■□□□□ 0.43
SCARB1-206ENST00000539320 NHLRC3Q5JS37 347 aa17.74■□□□□ 0.43
SCARB1-206ENST00000539320 PACRGLQ8N7B6 248 aa17.74■□□□□ 0.43
SCARB1-206ENST00000539320 OR52N1Q8NH53 320 aa17.74■□□□□ 0.43
SCARB1-206ENST00000539320 MRGPRDQ8TDS7 321 aa17.74■□□□□ 0.43
SCARB1-206ENST00000539320 TOMM40LQ969M1 308 aa17.74■□□□□ 0.43
SCARB1-206ENST00000539320 DPCDQ9BVM2 203 aaPredicted RBP17.74■□□□□ 0.43
SCARB1-206ENST00000539320 LINC00574Q9H8X3 128 aa17.74■□□□□ 0.43
SCARB1-206ENST00000539320 PCDHB16Q9NRJ7 776 aa17.74■□□□□ 0.43
SCARB1-206ENST00000539320 CHCHD3Q9NX63 227 aaKnown RBP17.74■□□□□ 0.43
SCARB1-206ENST00000539320 CLEC2DQ9UHP7 191 aa17.74■□□□□ 0.43
SCARB1-206ENST00000539320 ING4Q9UNL4 249 aa17.74■□□□□ 0.43
SCARB1-206ENST00000539320 ST3GAL6Q9Y274 331 aa17.74■□□□□ 0.43
SCARB1-206ENST00000539320 TRBV5-5A0A0J9YX44 114 aa17.73■□□□□ 0.43
SCARB1-206ENST00000539320 XPNPEP2O43895 674 aa17.73■□□□□ 0.43
SCARB1-206ENST00000539320 OR7C1O76099 320 aaPredicted RBP17.73■□□□□ 0.43
SCARB1-206ENST00000539320 RIPK1Q13546 671 aa17.73■□□□□ 0.43
SCARB1-206ENST00000539320 KPRPQ5T749 579 aaPredicted RBP17.73■□□□□ 0.43
SCARB1-206ENST00000539320 OSR2Q8N2R0 312 aa17.73■□□□□ 0.43
SCARB1-206ENST00000539320 SUMF2Q8NBJ7 301 aa17.73■□□□□ 0.43
SCARB1-206ENST00000539320 ORAI1Q96D31 301 aa17.73■□□□□ 0.43
SCARB1-206ENST00000539320 TMEM80Q96HE8 168 aa17.73■□□□□ 0.43
SCARB1-206ENST00000539320 IFT22Q9H7X7 185 aa17.73■□□□□ 0.43
SCARB1-206ENST00000539320 PAK1IP1Q9NWT1 392 aaPredicted RBP17.73■□□□□ 0.43
SCARB1-206ENST00000539320 ZNF581Q9P0T4 197 aa17.73■□□□□ 0.43
SCARB1-206ENST00000539320 NPIPB11E5RHQ5 1161 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 ANKRD65E5RJM6 399 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 J3QR06 171 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 CSTBP04080 98 aaKnown RBP17.72■□□□□ 0.43
SCARB1-206ENST00000539320 SERPINA2P20848 420 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 SSTR5P35346 364 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 LTC4SQ16873 150 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 ABCA11PQ4W5N1 156 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 DMKNQ6E0U4 476 aaPredicted RBP17.72■□□□□ 0.43
SCARB1-206ENST00000539320 LINC00596Q86U02 117 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 DHRSXQ8N5I4 330 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 OR5AU1Q8NGC0 362 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 GHSRQ92847 366 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 LEAP2Q969E1 77 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 S100A13Q99584 98 aa17.72■□□□□ 0.43
SCARB1-206ENST00000539320 M0QZK8 103 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 IGHV3-7P01780 117 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 LPLP06858 475 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 IGFBP3P17936 291 aaPredicted RBP17.71■□□□□ 0.43
SCARB1-206ENST00000539320 ADARB1P78563 741 aaKnown RBP17.71■□□□□ 0.43
SCARB1-206ENST00000539320 RCN1Q15293 331 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 Q499Y3 187 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 ZFP41Q8N8Y5 198 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 OR10A7Q8NGE5 316 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 RFESDQ8TAC1 157 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 ZNF184Q99676 751 aaPredicted RBP17.71■□□□□ 0.43
SCARB1-206ENST00000539320 CKLFQ9UBR5 152 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 PSG11Q9UQ72 335 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 MOB4Q9Y3A3 225 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 HSPE1-MOB4S4R3N1 261 aa17.71■□□□□ 0.43
SCARB1-206ENST00000539320 TRAV39A0A0B4J263 110 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 TMEM30CPA0ZSE6 113 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 SH2D7A6NKC9 451 aaPredicted RBP17.7■□□□□ 0.42
SCARB1-206ENST00000539320 GEMIN2O14893 280 aaKnown RBP17.7■□□□□ 0.42
SCARB1-206ENST00000539320 ZNF780AO75290 641 aaPredicted RBP17.7■□□□□ 0.42
SCARB1-206ENST00000539320 AMY1AP04745 511 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 AMY2AP04746 511 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 FSTP19883 344 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 GNG10P50151 68 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 CD83Q01151 205 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 MADCAM1Q13477 382 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 MPV17LQ2QL34 196 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 YIF1BQ5BJH7 314 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 ZNF485Q8NCK3 441 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 PGLYRP3Q96LB9 341 aa17.7■□□□□ 0.42
SCARB1-206ENST00000539320 A0A1W2PPI3 338 aa17.69■□□□□ 0.42
SCARB1-206ENST00000539320 A0A1W2PRX2 142 aa17.69■□□□□ 0.42
SCARB1-206ENST00000539320 MAGEA13PA6NCF6 341 aa17.69■□□□□ 0.42
SCARB1-206ENST00000539320 EFCAB10A6NFE3 127 aa17.69■□□□□ 0.42
SCARB1-206ENST00000539320 GPX5O75715 221 aa17.69■□□□□ 0.42
SCARB1-206ENST00000539320 SNRNP70P08621 437 aaKnown RBP17.69■□□□□ 0.42
SCARB1-206ENST00000539320 FAM106CPP0CH98 169 aa17.69■□□□□ 0.42
SCARB1-206ENST00000539320 TAS2R43P59537 309 aa17.69■□□□□ 0.42
SCARB1-206ENST00000539320 RPS11P62280 158 aaKnown RBP eCLIP17.69■□□□□ 0.42
SCARB1-206ENST00000539320 SLC22A6Q4U2R8 563 aa17.69■□□□□ 0.42
SCARB1-206ENST00000539320 CENPVQ7Z7K6 275 aaPredicted RBP17.69■□□□□ 0.42
SCARB1-206ENST00000539320 OR56B4Q8NH76 319 aa17.69■□□□□ 0.42
SCARB1-206ENST00000539320 GGHQ92820 318 aa17.69■□□□□ 0.42
SCARB1-206ENST00000539320 TRAV8-7A0A075B6U6 113 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 A0A1W2PP11 408 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 FAM90A18PA6NE21 464 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 FAM90A16PA6NEW6 464 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 FAM90A20PA6NIJ5 464 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 FAM90A9PA6NNJ1 464 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 FAM90A12PA8MX19 464 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 FAM90A5PA8MXJ8 464 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 FAM90A15PP0C7V4 464 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 FAM90A13PP0C7W8 464 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 FAM90A14PP0C7W9 464 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 FAM90A24PP0C7X0 464 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 RAB7AP51149 207 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 ST3GAL4Q11206 333 aa17.68■□□□□ 0.42
SCARB1-206ENST00000539320 C9orf152Q5JTZ5 239 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms