RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 FUOMA2VDF0 154 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 CEACAM18A8MTB9 384 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 OR2H2O95918 312 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 HAND1O96004 215 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 PMP2P02689 132 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 AMY2AP04746 511 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 DUX4L2P0CJ85 424 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 DUX4L3P0CJ86 424 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 DUX4L4P0CJ87 422 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 DUX4L5P0CJ88 424 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 DUX4L6P0CJ89 424 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 DUX4L7P0CJ90 424 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 DTYMKP23919 212 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 HRH1P35367 487 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 BCAP31P51572 246 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 MRPS15P82914 257 aaKnown RBP14.34□□□□□ -0.11
CLN6-202ENST00000538696 ZNF146Q15072 292 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 RNASE10Q5GAN6 216 aaKnown RBP14.34□□□□□ -0.11
CLN6-202ENST00000538696 DUX4L9Q6RFH8 374 aaPredicted RBP14.34□□□□□ -0.11
CLN6-202ENST00000538696 FIP1L1Q6UN15 594 aaKnown RBP14.34□□□□□ -0.11
CLN6-202ENST00000538696 LYPD2Q6UXB3 125 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 BTN2A1Q7KYR7 527 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 SPICQ8N5J4 248 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 CD177Q8N6Q3 437 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 BEST4Q8NFU0 473 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 OR51S1Q8NGJ8 323 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 OR4K15Q8NH41 348 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 CLDND2Q8NHS1 167 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 ANGPTL6Q8NI99 470 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 NEK7Q8TDX7 302 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 CREB3L1Q96BA8 519 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 MARVELD1Q9BSK0 173 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 DPCDQ9BVM2 203 aaPredicted RBP14.34□□□□□ -0.11
CLN6-202ENST00000538696 NUDT15Q9NV35 164 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 DUX4Q9UBX2 424 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 OR14J1Q9UGF5 321 aa14.34□□□□□ -0.11
CLN6-202ENST00000538696 SETXQ7Z333 2677 aaKnown RBP14.33□□□□□ -0.11
CLN6-202ENST00000538696 AKAP9Q99996 3911 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 RFPL4AA6NLU0 287 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 MCRIP1C9JLW8 97 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 RFPL4AL1F8VTS6 287 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 INMT-MINDY4F8WBC2 141 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 H3BUI4 141 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 SLC33A1O00400 549 aaPredicted RBP14.33□□□□□ -0.12
CLN6-202ENST00000538696 RAB25P57735 213 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 MEF2DQ14814 521 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 KCNJ8Q15842 424 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 PAN3Q58A45 887 aaKnown RBP14.33□□□□□ -0.12
CLN6-202ENST00000538696 BPIFB2Q8N4F0 458 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 GAFA1Q96PS6 74 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 SLC6A7Q99884 636 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 CHST6Q9GZX3 395 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 C20orf85Q9H1P6 137 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 C12orf4Q9NQ89 552 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 COPZ2Q9P299 210 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 CTSZQ9UBR2 303 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 METRNQ9UJH8 293 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 DOCK11Q5JSL3 2073 aa14.33□□□□□ -0.12
CLN6-202ENST00000538696 NKX6-3A6NJ46 265 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 DISC1C4P0D8 188 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 RNF223E7ERA6 249 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 F5H0A9 414 aaPredicted RBP14.32□□□□□ -0.12
CLN6-202ENST00000538696 SH2D1BO14796 132 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 NDUFB6O95139 128 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 GLAP06280 429 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 TBPP20226 339 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 GABRA2P47869 451 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 ACTBL2Q562R1 376 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 ATPAF1Q5TC12 328 aaPredicted RBP14.32□□□□□ -0.12
CLN6-202ENST00000538696 ZNF788Q6ZQV5 615 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 CADM3Q8N126 398 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 FAM216BQ8N7L0 139 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 OR5H2Q8NGV7 314 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 CCL13Q99616 98 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 PATZ1Q9HBE1 687 aaKnown RBP14.32□□□□□ -0.12
CLN6-202ENST00000538696 CHMP1AQ9HD42 196 aaPredicted RBP14.32□□□□□ -0.12
CLN6-202ENST00000538696 ETAA1Q9NY74 926 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 FLVCR2Q9UPI3 526 aa14.32□□□□□ -0.12
CLN6-202ENST00000538696 ADAM20O43506 726 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 FCN3O75636 299 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 NAPSAO96009 420 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 IGHV2-5P01817 119 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 H2AFB2P0C5Z0 115 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 SELLP14151 372 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 RPS2P15880 293 aaKnown RBP14.31□□□□□ -0.12
CLN6-202ENST00000538696 USF1P22415 310 aaPredicted RBP14.31□□□□□ -0.12
CLN6-202ENST00000538696 IL2RGP31785 369 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 PRDX2P32119 198 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 VAX1Q5SQQ9 334 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 PLPPR1Q8TBJ4 325 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 MRPL30Q8TCC3 161 aaKnown RBP14.31□□□□□ -0.12
CLN6-202ENST00000538696 SDSLQ96GA7 329 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 REG4Q9BYZ8 158 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 DNTTIP1Q9H147 329 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 ZNF665Q9H7R5 613 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 KAAG1Q9UBP8 84 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 GLS2Q9UI32 602 aa14.31□□□□□ -0.12
CLN6-202ENST00000538696 ARPC1BO15143 372 aaKnown RBP14.3□□□□□ -0.12
CLN6-202ENST00000538696 SIGLEC5O15389 551 aa14.3□□□□□ -0.12
CLN6-202ENST00000538696 NDUFA2O43678 99 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms