RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 UCP2P55851 309 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 SRPXP78539 464 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 ERGIC1Q969X5 290 aa11.91□□□□□ -0.5
LIMK1-208ENST00000538333 SIGLEC5O15389 551 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 JTBO76095 146 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 APOC3P02656 99 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
LIMK1-208ENST00000538333 HLA-DRB3P79483 266 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 PSG7Q13046 419 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 ZNF154Q13106 437 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 BTN1A1Q13410 526 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 DEFB109BQ30KR1 87 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 SPIN3Q5JUX0 258 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 CNEP1R1Q8N9A8 125 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 ZNF565Q8N9K5 539 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 WDR31Q8NA23 367 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 DMBX1Q8NFW5 382 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 OR4A4PQ8NGN8 299 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 WNT2BQ93097 391 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 SARAFQ96BY9 339 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 SAT2Q96F10 170 aaPredicted RBP11.9□□□□□ -0.5
LIMK1-208ENST00000538333 BSCL2Q96G97 398 aaPredicted RBP11.9□□□□□ -0.5
LIMK1-208ENST00000538333 CABLES2Q9BTV7 478 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 ZFP57Q9NU63 452 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 PLA2G2EQ9NZK7 142 aa11.9□□□□□ -0.5
LIMK1-208ENST00000538333 CNOT1A5YKK6 2376 aaKnown RBP11.9□□□□□ -0.5
LIMK1-208ENST00000538333 RIF1Q5UIP0 2472 aaKnown RBP11.9□□□□□ -0.51
LIMK1-208ENST00000538333 ZNF705EA8MWA4 302 aaPredicted RBP11.89□□□□□ -0.51
LIMK1-208ENST00000538333 ST8SIA3O43173 380 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 CDS2O95674 445 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 CBR1P16152 277 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 ZNF324BQ6AW86 544 aaPredicted RBP11.89□□□□□ -0.51
LIMK1-208ENST00000538333 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
LIMK1-208ENST00000538333 ATRAIDQ6UW56 229 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 Q8IYB0 196 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 UBAC2Q8NBM4 344 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 OR1J1Q8NGS3 322 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 LILRB1Q8NHL6 650 aaPredicted RBP11.89□□□□□ -0.51
LIMK1-208ENST00000538333 ARL11Q969Q4 196 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 GPHA2Q96T91 129 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 NRIP2Q9BQI9 281 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 ADAT1Q9BUB4 502 aaKnown RBP11.89□□□□□ -0.51
LIMK1-208ENST00000538333 ARV1Q9H2C2 271 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 C11orf1Q9H5F2 150 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 MMP26Q9NRE1 261 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 CCL28Q9NRJ3 127 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 TREM2Q9NZC2 230 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 RCL1Q9Y2P8 373 aaKnown RBP11.89□□□□□ -0.51
LIMK1-208ENST00000538333 PRR14LQ5THK1 2151 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 INTS1Q8N201 2190 aaKnown RBP11.89□□□□□ -0.51
LIMK1-208ENST00000538333 NKX2-6A6NCS4 301 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 NUDT19A8MXV4 375 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 DEGS1O15121 323 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 PGA5P0DJD9 388 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 ZNF44P15621 663 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 UCP1P25874 307 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 P2RY1P47900 373 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 SULT1A2P50226 295 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 H1FOOQ8IZA3 346 aaPredicted RBP11.89□□□□□ -0.51
LIMK1-208ENST00000538333 SELENOHQ8IZQ5 122 aaKnown RBP11.89□□□□□ -0.51
LIMK1-208ENST00000538333 C1orf162Q8NEQ5 155 aaPredicted RBP11.89□□□□□ -0.51
LIMK1-208ENST00000538333 POLDIP2Q9Y2S7 368 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 POMT1Q9Y6A1 747 aa11.89□□□□□ -0.51
LIMK1-208ENST00000538333 GPR137BO60478 399 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 OR2H2O95918 312 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 MPV17P39210 176 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 FOXF2Q12947 444 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 ACSF3Q4G176 576 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-208ENST00000538333 GPR157Q5UAW9 335 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 SHEQ5VZ18 495 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 KLF14Q8TD94 323 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-208ENST00000538333 TAAR6Q96RI8 345 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 DKK4Q9UBT3 224 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 UBE2J1Q9Y385 318 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-208ENST00000538333 TMEM218A2RU14 115 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 NPIPB11E5RHQ5 1161 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 SLC33A1O00400 549 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-208ENST00000538333 CDIPTO14735 213 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 HSD17B6O14756 317 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 MDH2P40926 338 aaKnown RBP11.88□□□□□ -0.51
LIMK1-208ENST00000538333 ZNF146Q15072 292 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 PXDC1Q5TGL8 231 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 CLEC9AQ6UXN8 241 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 ZNF695Q8IW36 515 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 PLPPR1Q8TBJ4 325 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 WFDC1Q9HC57 220 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 PLSCR4Q9NRQ2 329 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 OR2W1Q9Y3N9 320 aa11.88□□□□□ -0.51
LIMK1-208ENST00000538333 GTF3C1Q12789 2109 aa11.87□□□□□ -0.51
LIMK1-208ENST00000538333 PRRC2CQ9Y520 2896 aaKnown RBP11.87□□□□□ -0.51
LIMK1-208ENST00000538333 LOC105371267A0A1B0GV96 52 aa11.87□□□□□ -0.51
LIMK1-208ENST00000538333 DUXBA0A1W2PPF3 345 aa11.87□□□□□ -0.51
LIMK1-208ENST00000538333 CLEC18AA5D8T8 446 aa11.87□□□□□ -0.51
LIMK1-208ENST00000538333 ZNF891A8MT65 544 aaPredicted RBP11.87□□□□□ -0.51
LIMK1-208ENST00000538333 H0YL77 283 aa11.87□□□□□ -0.51
LIMK1-208ENST00000538333 ABCD4O14678 606 aa11.87□□□□□ -0.51
LIMK1-208ENST00000538333 SELEP16581 610 aa11.87□□□□□ -0.51
LIMK1-208ENST00000538333 LPAR6P43657 344 aa11.87□□□□□ -0.51
LIMK1-208ENST00000538333 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms