RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 RCC1P18754 421 aaPredicted RBP9.54□□□□□ -0.88
CDCA3-206ENST00000536241 PRSS57Q6UWY2 283 aa9.54□□□□□ -0.88
CDCA3-206ENST00000536241 GAPTQ8N292 157 aa9.54□□□□□ -0.88
CDCA3-206ENST00000536241 H1FXQ92522 213 aaKnown RBP9.54□□□□□ -0.88
CDCA3-206ENST00000536241 Q9N2K0 584 aa9.54□□□□□ -0.88
CDCA3-206ENST00000536241 C12orf4Q9NQ89 552 aa9.54□□□□□ -0.88
CDCA3-206ENST00000536241 CLN8Q9UBY8 286 aa9.54□□□□□ -0.88
CDCA3-206ENST00000536241 MTFP1Q9UDX5 166 aa9.54□□□□□ -0.88
CDCA3-206ENST00000536241 APCP25054 2843 aa9.54□□□□□ -0.88
CDCA3-206ENST00000536241 TACC2O95359 2948 aa9.54□□□□□ -0.88
CDCA3-206ENST00000536241 ARHGAP32A7KAX9 2087 aa9.54□□□□□ -0.88
CDCA3-206ENST00000536241 ANKRD17O75179 2603 aaKnown RBP9.53□□□□□ -0.88
CDCA3-206ENST00000536241 IGKV1D-8A0A087WSZ0 117 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 FUOMA2VDF0 154 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 H7C1Q1 480 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 FCGR3AP08637 254 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 SLC25A16P16260 332 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 IL2RGP31785 369 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 CBX5P45973 191 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 P2RX3P56373 397 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 GNB2P62879 340 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 PAX5Q02548 391 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 BTN2A1Q7KYR7 527 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 HOGA1Q86XE5 327 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 KRTAP1-3Q8IUG1 177 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 LYSMD2Q8IV50 215 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 OR13A1Q8NGR1 328 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 SSBP3Q9BWW4 388 aaPredicted RBP9.53□□□□□ -0.88
CDCA3-206ENST00000536241 IFT46Q9NQC8 304 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 ABCB10Q9NRK6 738 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 TRBV6-6A0A0A6YYG2 114 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 ODAMA1E959 279 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 GPR37O15354 613 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 IL7P13232 177 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 USF1P22415 310 aaPredicted RBP9.53□□□□□ -0.88
CDCA3-206ENST00000536241 DTYMKP23919 212 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 ZFP36P26651 326 aaKnown RBP9.53□□□□□ -0.88
CDCA3-206ENST00000536241 HLA-DMAP28067 261 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 GDNFP39905 211 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 NPY4RP50391 375 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 RPL31P62899 125 aaKnown RBP9.53□□□□□ -0.88
CDCA3-206ENST00000536241 IFITM3Q01628 133 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 ESCO2Q56NI9 601 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 TMEM200BQ69YZ2 307 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 OR52W1Q6IF63 320 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 ZNF880Q6PDB4 577 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 ZNF565Q8N9K5 539 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 BEST4Q8NFU0 473 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 MRGPRDQ8TDS7 321 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 Q96MF0 132 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 FOXC2Q99958 501 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 CCDC32Q9BV29 185 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 NCOR1P1Q9H4R4 102 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 C19orf12Q9NSK7 152 aa9.53□□□□□ -0.88
CDCA3-206ENST00000536241 RBMX2Q9Y388 322 aaKnown RBP9.53□□□□□ -0.88
CDCA3-206ENST00000536241 LINC00854A0A1B0GVQ3 168 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 SCTP09683 121 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 GSTT2P0CG29 244 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 GSTT2BP0CG30 244 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 CGB3P0DN86 165 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 CGB7P0DN87 165 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 NAT1P18440 290 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 GZMHP20718 246 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 CR1LQ2VPA4 569 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 FAM185AQ8N0U4 392 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 RFESDQ8TAC1 157 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 UBALD1Q8TB05 177 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 SNAPC3Q92966 411 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 TRIM63Q969Q1 353 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 RAB39BQ96DA2 213 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 REG4Q9BYZ8 158 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 TAF9BQ9HBM6 251 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 MBNL3Q9NUK0 354 aaKnown RBP9.52□□□□□ -0.89
CDCA3-206ENST00000536241 OR6C3Q9NZP0 311 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 ITGB1BP2Q9UKP3 347 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 NAV2Q8IVL1 2488 aa9.52□□□□□ -0.89
CDCA3-206ENST00000536241 YLPM1P49750 1951 aaKnown RBP9.51□□□□□ -0.89
CDCA3-206ENST00000536241 LOC105371242A0A075B767 164 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 A0A096LNT2 108 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 TRGV10A0A0A0MS01 117 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 hADV38S2A0JD32 116 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 POM121CA8CG34 1229 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 KIAA1324LA8MWY0 1029 aaPredicted RBP9.51□□□□□ -0.89
CDCA3-206ENST00000536241 TRDCB7Z8K6 153 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 FAM157AC9JC47 383 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 RNF223E7ERA6 249 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 UPK1BO75841 260 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 RCVRNP35243 200 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 GLP1RP43220 463 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 INPP1P49441 399 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 ACTBP60709 375 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 ACTG1P63261 375 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 LCN2P80188 198 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 SSBP1Q04837 148 aaKnown RBP9.51□□□□□ -0.89
CDCA3-206ENST00000536241 MEF2CQ06413 473 aaPredicted RBP9.51□□□□□ -0.89
CDCA3-206ENST00000536241 ZNF273Q14593 569 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 SRSF7Q16629 238 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDCA3-206ENST00000536241 TRIQKQ629K1 86 aa9.51□□□□□ -0.89
CDCA3-206ENST00000536241 ZNF57Q68EA5 555 aaPredicted RBP9.51□□□□□ -0.89
CDCA3-206ENST00000536241 TCF23Q7RTU1 214 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms