RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 C1orf147Q96MC9 270 aaPredicted RBP7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 TSNAXQ99598 290 aaKnown RBP7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 PCGF1Q9BSM1 259 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 TEX12Q9BXU0 123 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 TMPRSS5Q9H3S3 457 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 ZMAT3Q9HA38 289 aaKnown RBP7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 ZNF319Q9P2F9 582 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 CLEC2DQ9UHP7 191 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 KLHDC2Q9Y2U9 406 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 RHBDD3Q9Y3P4 386 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 C9orf170A2RU37 121 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 C1orf196B1AJZ1 125 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 TMPRSS2O15393 492 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 PRODHO43272 600 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 NDUFS6O75380 124 aaKnown RBP7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 KDM4BO94953 1096 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 ALDOBP05062 364 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 SFTPBP07988 381 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 RNASE1P07998 156 aaKnown RBP7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 SPP1P10451 314 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 VAMP1P23763 118 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 CFHR2P36980 270 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 RIDAP52758 137 aaKnown RBP7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 CAPZA1P52907 286 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 PSMA6P60900 246 aaKnown RBP7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 RPS25P62851 125 aaKnown RBP7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 FABP5Q01469 135 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 FOXL1Q12952 345 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 KLF9Q13886 244 aaPredicted RBP7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 DOC2BQ14184 412 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 SLC9A3R2Q15599 337 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 SLC35D3Q5M8T2 416 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 GPR157Q5UAW9 335 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 TEX36Q5VZQ5 186 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 RUSC1-AS1Q66K80 236 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 GLDNQ6ZMI3 551 aaPredicted RBP7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 C9orf139Q6ZV77 190 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 C11orf53Q8IXP5 236 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF561Q8N587 486 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 C15orf54Q8N8G6 183 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 PNLDC1Q8NA58 520 aaKnown RBP7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF485Q8NCK3 441 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 CSNK2A3Q8NEV1 391 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 C15orf40Q8WUR7 153 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 ZDHHC16Q969W1 377 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 SLC25A28Q96A46 364 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 MICU1Q9BPX6 476 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 RGCCQ9H4X1 137 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 TAS2R3Q9NYW6 316 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 TVP23BQ9NYZ1 205 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 LAMP5Q9UJQ1 280 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 LRP12Q9Y561 859 aa7.08□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF850A8MQ14 1090 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF879B4DU55 563 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 PSMD9O00233 223 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 P2RY10O00398 339 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 DVL1O14640 695 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 CDIPTO14735 213 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 TNFRSF13BO14836 293 aaPredicted RBP7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 CREBL2O60519 120 aaPredicted RBP7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 TOX4O94842 621 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 LHBP01229 141 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 CRYBA1P05813 215 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 LIPFP07098 398 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 MRPL3P09001 348 aaKnown RBP7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 SLC2A5P22732 501 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 ACKR3P25106 362 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 GPX4P36969 197 aaPredicted RBP7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 PTGFRP43088 359 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 CCR9P51686 369 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 HCCSP53701 268 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 MRPS10P82664 201 aaKnown RBP7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 EFNB1P98172 346 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 PRDX4Q13162 271 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF345Q14585 488 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 SMCO1Q147U7 214 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 DEFB112Q30KQ8 113 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 NKAPLQ5M9Q1 402 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 OLFML2AQ68BL7 652 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF626Q68DY1 528 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 DUX4L9Q6RFH8 374 aaPredicted RBP7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 WDR82Q6UXN9 313 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 LDLRAD3Q86YD5 345 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 FGFRL1Q8N441 504 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 OR8B12Q8NGG6 310 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 THAP6Q8TBB0 222 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 PCNPQ8WW12 178 aaKnown RBP7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 PIGCQ92535 297 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 TAF15Q92804 592 aaKnown RBP eCLIP7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 SEH1LQ96EE3 360 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 LYZL4Q96KX0 146 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 TBX15Q96SF7 602 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 CCL13Q99616 98 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 C2orf88Q9BSF0 95 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 RTL8AQ9BWD3 113 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 SEC11CQ9BY50 192 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 TTTY10Q9BZA0 68 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 C20orf85Q9H1P6 137 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 TUBA4BQ9H853 241 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 TNFRSF19Q9NS68 423 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms