RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 BUB1B-PAK6H3BSN5 160 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 ALDOBP05062 364 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 CSN2P05814 226 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 MYL12AP19105 171 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 HTR1DP28221 377 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 MAP2K4P45985 399 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 REG1BP48304 166 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 BDH1Q02338 343 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 PLA2G7Q13093 441 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 HNF4GQ14541 408 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 HERPUD1Q15011 391 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 AANATQ16613 207 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 HLA-DRB5Q30154 266 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 C6orf141Q5SZD1 244 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 TPTE2P1Q5T6R2 138 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 TMPRSS11AQ6ZMR5 421 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 C8orf59Q8N0T1 100 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-215ENST00000533946 OR4C13Q8NGP0 309 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 FAM46BQ96A09 425 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 WNT10AQ9GZT5 417 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 TMEM138Q9NPI0 162 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 PLCXD1Q9NUJ7 323 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 IDI2-AS1Q9NZ38 188 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 DPM3Q9P2X0 92 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 LINC00527Q9UJ94 153 aa7.68□□□□□ -1.18
SSBP3-215ENST00000533946 A0A087X0M5 115 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 A0A0A6YYD4 124 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 A0A1B0GX30 115 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 hCG_1809904A0A1W2PP81 198 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 A0A1W2PPE2 198 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 A0A1W2PPI3 338 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 A0A1W2PR64 198 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 A0A1W2PRV1 198 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 ERICH4A6NGS2 130 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 F2RL2O00254 374 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 TIMM23O14925 209 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 GPX5O75715 221 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 OR7C1O76099 320 aaPredicted RBP7.67□□□□□ -1.18
SSBP3-215ENST00000533946 MT-ND4P03905 459 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 CDK1P06493 297 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 LPLP06858 475 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 RCC1P18754 421 aaPredicted RBP7.67□□□□□ -1.18
SSBP3-215ENST00000533946 CD34P28906 385 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 ZNF134P52741 427 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 RIPK1Q13546 671 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 IL13RA2Q14627 380 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 IRF3Q14653 427 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 GNMTQ14749 295 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 Q499Y3 187 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 ABCA11PQ4W5N1 156 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 ATAD3CQ5T2N8 411 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 GLIPR1L1Q6UWM5 242 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 UNQ9370/PRO34162Q6UXP9 181 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 LRRTM1Q86UE6 522 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 OSR2Q8N2R0 312 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 JAGN1Q8N5M9 183 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 DRAM1Q8N682 238 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 OR4K15Q8NH41 348 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 OR56B4Q8NH76 319 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 OR1L1Q8NH94 360 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 TMEM203Q969S6 136 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 MRPL48Q96GC5 212 aaKnown RBP7.67□□□□□ -1.18
SSBP3-215ENST00000533946 TMED9Q9BVK6 235 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 TAS2R3Q9NYW6 316 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 GLS2Q9UI32 602 aa7.67□□□□□ -1.18
SSBP3-215ENST00000533946 MRPS28Q9Y2Q9 187 aaKnown RBP7.67□□□□□ -1.18
SSBP3-215ENST00000533946 UBE2QL1A1L167 161 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 EFCAB10A6NFE3 127 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 ZNF729A6NN14 1252 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-215ENST00000533946 C12orf77C9JDV5 145 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 J3QR06 171 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 M0QZ24 198 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 IL1AP01583 271 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 DYNLT3P51808 116 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 WNT4P56705 351 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 LOXL3P58215 753 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 MRPL28Q13084 256 aaKnown RBP7.66□□□□□ -1.18
SSBP3-215ENST00000533946 PDLIM3Q53GG5 364 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-215ENST00000533946 OXLD1Q5BKU9 147 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 MINOS1Q5TGZ0 78 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 TMEM91Q6ZNR0 172 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 STX19Q8N4C7 294 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 CHST4Q8NCG5 386 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 SETD9Q8NE22 299 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 OR10V1Q8NGI7 309 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 OR2T6Q8NHC8 308 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 RITA1Q96K30 269 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 NOL4LQ96MY1 436 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-215ENST00000533946 SLC25A33Q9BSK2 321 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 NPFFR1Q9GZQ6 430 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 PARP12Q9H0J9 701 aaKnown RBP7.66□□□□□ -1.18
SSBP3-215ENST00000533946 METTL9Q9H1A3 318 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 MMP27Q9H306 513 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 LINC00574Q9H8X3 128 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 ABCB10Q9NRK6 738 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 MINOS1-NBL1R4GNA1 71 aa7.66□□□□□ -1.18
SSBP3-215ENST00000533946 FAM90A18PA6NE21 464 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 FAM90A16PA6NEW6 464 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 FAM90A20PA6NIJ5 464 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 FAM90A9PA6NNJ1 464 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms