RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	SUMF2	Q8NBJ7	301 aa		14.21	□□□□□ -0.13
BBS1-223	ENST00000533644	CFHR4	Q92496	578 aa		14.21	□□□□□ -0.13
BBS1-223	ENST00000533644	S100A13	Q99584	98 aa		14.21	□□□□□ -0.13
BBS1-223	ENST00000533644	CALY	Q9NYX4	217 aa		14.21	□□□□□ -0.13
BBS1-223	ENST00000533644	ERGIC3	Q9Y282	383 aa		14.21	□□□□□ -0.13
BBS1-223	ENST00000533644		A0A1W2PP11	408 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	LEUTX	A8MZ59	168 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	NPIPB11	E5RHQ5	1161 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	LY6L	H3BQJ8	138 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	GEMIN2	O14893	280 aa	Known RBP	14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	OR7C1	O76099	320 aa	Predicted RBP	14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	IL1A	P01583	271 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	CDK1	P06493	297 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	SERPINA2	P20848	420 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	AQP4	P55087	323 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	C6orf141	Q5SZD1	244 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	THRSP	Q92748	146 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	CREB3L1	Q96BA8	519 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	PCDHB16	Q9NRJ7	776 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644	SERTAD4	Q9NUC0	356 aa		14.2	□□□□□ -0.14
BBS1-223	ENST00000533644		A0A1W2PPK0	400 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	BUB1B-PAK6	H3BSN5	160 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	TOR1A	O14656	332 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	TSPAN15	O95858	294 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	GTF2F2	P13984	249 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	CEACAM3	P40198	252 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	PRRX1	P54821	245 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	GPR176	Q14439	515 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	HABP2	Q14520	560 aa	Predicted RBP	14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	C2orf68	Q2NKX9	166 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	SLC22A6	Q4U2R8	563 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	TPTE2P1	Q5T6R2	138 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644		Q6ZTK2	550 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	OR9G1	Q8NH87	305 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	MUL1	Q969V5	352 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	MND1	Q9BWT6	205 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	IDI2-AS1	Q9NZ38	188 aa		14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	MRPS28	Q9Y2Q9	187 aa	Known RBP	14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	LSM2	Q9Y333	95 aa	Known RBP	14.19	□□□□□ -0.14
BBS1-223	ENST00000533644	PRKDC	P78527	4128 aa	Known RBP	14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	OOSP1	A8MZH6	123 aa		14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	NFYB	P25208	207 aa		14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	MAPK3	P27361	379 aa	Predicted RBP	14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	BRS3	P32247	399 aa		14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	SSTR5	P35346	364 aa		14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	JAGN1	Q8N5M9	183 aa		14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	NKAIN3	Q8N8D7	197 aa		14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	OR10A7	Q8NGE5	316 aa		14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	MRGPRD	Q8TDS7	321 aa		14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	WIPF2	Q8TF74	440 aa	Predicted RBP	14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	MRPS24	Q96EL2	167 aa	Known RBP	14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	PRSS22	Q9GZN4	317 aa		14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	MMP28	Q9H239	520 aa		14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	RCC2	Q9P258	522 aa	Known RBP	14.18	□□□□□ -0.14
BBS1-223	ENST00000533644	TMEM30CP	A0ZSE6	113 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	ARHGDIB	P52566	201 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	BLCAP	P62952	87 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	SLC35A2	P78381	396 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	IRF3	Q14653	427 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	GLIPR1L1	Q6UWM5	242 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	SLC16A12	Q6ZSM3	486 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	C16orf82	Q7Z2V1	217 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	SGCD	Q92629	289 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	MYDGF	Q969H8	173 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	LIN7B	Q9HAP6	207 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	SPACA1	Q9HBV2	294 aa		14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	TET2	Q6N021	2002 aa	Predicted RBP	14.17	□□□□□ -0.14
BBS1-223	ENST00000533644	TRAV39	A0A0B4J263	110 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	PTGES3L	E9PB15	166 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644		J3QR06	171 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	MAS1	P04201	325 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	VSIG10L2	P0DP72	767 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	GABPB1	Q06547	395 aa	Predicted RBP	14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	FBLN7	Q53RD9	439 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	ATAD3C	Q5T2N8	411 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	AWAT2	Q6E213	333 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	CCDC144NL	Q6NUI1	221 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	UNQ9370/PRO34162	Q6UXP9	181 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644		Q6ZS46	218 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	MS4A15	Q8N5U1	240 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	OR5M11	Q96RB7	305 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	UQCC2	Q9BRT2	126 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	WNT10A	Q9GZT5	417 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	SCN3B	Q9NY72	215 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	PSG11	Q9UQ72	335 aa		14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	14.16	□□□□□ -0.14
BBS1-223	ENST00000533644	NOTCH1	P46531	2555 aa		14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	C15orf65	H3BRN8	121 aa		14.15	□□□□□ -0.14
BBS1-223	ENST00000533644		H3BUI4	141 aa		14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	CSF1	P09603	554 aa		14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	GZMH	P20718	246 aa		14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	MYF6	P23409	242 aa		14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	CD24	P25063	80 aa		14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	GP2	P55259	537 aa	Known RBP	14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	RBM39	Q14498	530 aa	Known RBP	14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	INSL4	Q14641	139 aa		14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	SPHAR	Q15513	63 aa		14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	ZNF497	Q6ZNH5	498 aa		14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	TMEM104	Q8NE00	496 aa		14.15	□□□□□ -0.14
BBS1-223	ENST00000533644	RFESD	Q8TAC1	157 aa		14.15	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms