RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 FAM89BQ8N5H3 189 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 GDPD1Q8N9F7 314 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 CHST4Q8NCG5 386 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 ITLN1Q8WWA0 313 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 OR2V2Q96R30 315 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 OCSTAMPQ9BR26 566 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 NICN1Q9BSH3 213 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 TM2D1Q9BX74 207 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 TLNRD1Q9H1K6 362 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 UFSP2Q9NUQ7 469 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 C1orf123Q9NWV4 160 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 RABL2AQ9UBK7 228 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 RABL2BQ9UNT1 228 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 PPP1R3CQ9UQK1 317 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 POLDIP2Q9Y2S7 368 aa9.29□□□□□ -0.92
TRAPPC4-213ENST00000533149 DOCK11Q5JSL3 2073 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 A0A0A6YYH2 397 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 A6NJ64 397 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 SOCS1O15524 211 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 NOS1APO75052 506 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 SCGNO76038 276 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 PTBP3O95758 552 aaKnown RBP9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 ACAA1P09110 424 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 PGA5P0DJD9 388 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 PMELP40967 661 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 TMEM50BP56557 158 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 COL10A1Q03692 680 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 DCTN2Q13561 401 aaKnown RBP9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 CDNFQ49AH0 187 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 LDLRAD3Q86YD5 345 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 SNX29P2Q8IUI4 249 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 OR8H2Q8N162 312 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 CELF2-AS1Q8N7Q2 184 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 OR56B1Q8NGI3 324 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 OR10R2Q8NGX6 335 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 MRPS24Q96EL2 167 aaKnown RBP9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 NEIL1Q96FI4 390 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 Q96M66 194 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 TMEM165Q9HC07 324 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 RBFOX1Q9NWB1 397 aaKnown RBP9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 IL19Q9UHD0 177 aa9.28□□□□□ -0.92
TRAPPC4-213ENST00000533149 TMEM178BH3BS89 294 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 IFNL4K9M1U5 179 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 AKR7A2O43488 359 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 PTHLHP12272 177 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 BLVRBP30043 206 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 SNU13P55769 128 aaKnown RBP9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 ERVK11-1P61568 191 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 IFITM3Q01628 133 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 BAK1Q16611 211 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 PIGYQ3MUY2 71 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 WDR82Q6UXN9 313 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 MOGAT3Q86VF5 341 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM58AQ8N1B3 248 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 Q8N402 240 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 POC1AQ8NBT0 407 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 OR4S1Q8NGB4 309 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 OR8B3Q8NGG8 313 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 C15orf40Q8WUR7 153 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 OR8B2Q96RD0 313 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 NRIP2Q9BQI9 281 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 PCGF1Q9BSM1 259 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 AUNIPQ9H7T9 357 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 RHOFQ9HBH0 211 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 ABCB10Q9NRK6 738 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 ST3GAL6Q9Y274 331 aa9.27□□□□□ -0.93
TRAPPC4-213ENST00000533149 TENM3Q9P273 2699 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 CENPVL3A0A0U1RRI6 287 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 hCG_1807616A0A1W2PRN6 198 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 BTBD17A6NE02 478 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 FOXI3A8MTJ6 420 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 GEMIN2O14893 280 aaKnown RBP9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 CTDSPLO15194 276 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 ENSAO43768 121 aaKnown RBP9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 UPK1BO75841 260 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 NXPH2O95156 264 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 PRKACAP17612 351 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 GABRR1P24046 479 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 CFHR2P36980 270 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 GATA4P43694 442 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 RBM11P57052 281 aaKnown RBP9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 GMFBP60983 142 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 DGCR2P98153 550 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 ZNF260Q3ZCT1 412 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 RNASE12Q5GAN4 147 aaKnown RBP9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 NHLRC3Q5JS37 347 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 PLAC9Q5JTB6 97 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 C11orf88Q6PI97 169 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 RTN4RL2Q86UN3 420 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 Q8IYB0 196 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 OR10Z1Q8NGY1 313 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 EMG1Q92979 244 aaKnown RBP9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 RAB3CQ96E17 227 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 THAP7Q9BT49 309 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 CCDC32Q9BV29 185 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 ZNF581Q9P0T4 197 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 CLN8Q9UBY8 286 aa9.26□□□□□ -0.93
TRAPPC4-213ENST00000533149 IGHV1-69DA0A0B4J2H0 117 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 GSTZ1O43708 216 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 LANCL1O43813 399 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms