RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 OR2J1Q9GZK6 312 aa13.32□□□□□ -0.28
PCDHA3-202ENST00000532566 NLRC5Q86WI3 1866 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 OOEPA6NGQ2 149 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 HSBP1L1C9JCN9 74 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 CYTIPO60759 359 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 S100A8P05109 93 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 ATRXP46100 2492 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 UBE2G1P62253 170 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 MYOZ1Q9NP98 299 aaPredicted RBP13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 MED12Q93074 2177 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 DYNLT3P51808 116 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 UBE2G2P60604 165 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 GNB1P62873 340 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 SNAI3Q3KNW1 292 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 FFAR4Q5NUL3 377 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 C10orf128Q5T292 105 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 TRAV39A0A0B4J263 110 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 DEFA6Q01524 100 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 NAAAQ02083 359 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 TMEM255AQ5JRV8 349 aa13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 NUDT16L1Q9BRJ7 211 aaKnown RBP13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 AKIRIN1Q9H9L7 192 aaPredicted RBP13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 CHCHD2Q9Y6H1 151 aaPredicted RBP13.31□□□□□ -0.28
PCDHA3-202ENST00000532566 RAMP1O60894 148 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 GNG10P50151 68 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 FGF12P61328 243 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 H3F3AP84243 136 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 ICE1Q9Y2F5 2266 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 A0A1W2PPQ1 181 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 ERVH48-1M5A8F1 160 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 AGFG2O95081 481 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 H2BFSP57053 126 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 EWSR1Q01844 656 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 ZNF90Q03938 601 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 PDZD11Q5EBL8 140 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 ETV3LQ6ZN32 361 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 ADAM10O14672 748 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 GAS1P54826 345 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 ATP6V1FQ16864 119 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 ZNF488Q96MN9 340 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 SRXN1Q9BYN0 137 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 PRDM6Q9NQX0 595 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 KIAA1456Q9P272 454 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 IGLV3-12A0A075B6K2 115 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 CD74P04233 296 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 BPIFB3P59826 476 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 UBE2V2Q15819 145 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 PPP1R32Q7Z5V6 425 aa13.3□□□□□ -0.28
PCDHA3-202ENST00000532566 IGKV1D-43A0A0B4J1Z2 117 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 hADV38S2A0JD32 116 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 K7EQM0 130 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 CFDP00746 253 aaPredicted RBP13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 GZMHP20718 246 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 TMEM210A6NLX4 147 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 OR10J4P0C629 311 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 ZNF660Q6AZW8 331 aaPredicted RBP13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 MRGPRFQ96AM1 343 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 ATP5SQ99766 215 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 TMEM147Q9BVK8 224 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 CLEC12BQ2HXU8 276 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 BTNL8Q6UX41 500 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 ZNF331Q9NQX6 463 aaPredicted RBP13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 TUBG2Q9NRH3 451 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 HSF4Q9ULV5 492 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 DUXBA0A1W2PPF3 345 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 J3QRE1 110 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 OR2A4O95047 310 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 SEC11BP0C7V7 166 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 NPBWR1P48145 328 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 RAB13P51153 203 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 VMA21Q3ZAQ7 101 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 FNDC7Q5VTL7 733 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 OR2A7Q96R45 310 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 RNF122Q9H9V4 155 aa13.29□□□□□ -0.28
PCDHA3-202ENST00000532566 MYLKQ15746 1914 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 IGHV3-13P01766 116 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 IGHV3-7P01780 117 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 MBPP02686 304 aaPredicted RBP13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 CDCP2Q5VXM1 449 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 FAM214BQ7L5A3 538 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 NFAM1Q8NET5 270 aaPredicted RBP13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 MS4A3Q96HJ5 214 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 GAL3ST2Q9H3Q3 398 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 MSL2Q9HCI7 577 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 SLC2A8Q9NY64 477 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 MMP24Q9Y5R2 645 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 FREM3P0C091 2139 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 ZNF154Q13106 437 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 C4orf17Q53FE4 359 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 Q5BKY6 102 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 STUMQ69YW2 141 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 CCL17Q92583 94 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 ACY3Q96HD9 319 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 RBFOX3A6NFN3 312 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 CDRT15L2A8MXV6 281 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 KIR2DS2P43631 304 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 P2RY4P51582 365 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 GABRA6Q16445 453 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 BATFQ16520 125 aa13.28□□□□□ -0.28
PCDHA3-202ENST00000532566 TMEM56Q96MV1 263 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms